RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 PSMA3P25788 255 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 MAOBP27338 520 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 UBE2MP61081 183 aaKnown RBP13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 C12orf73Q69YU5 71 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TANGO2Q6ICL3 276 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SFXN4Q6P4A7 337 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 CAMKMTQ7Z624 323 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 NATD1Q8N6N6 113 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 PHOSPHO1Q8TCT1 267 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 PDCD10Q9BUL8 212 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 METTL17Q9H7H0 456 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 PELI2Q9HAT8 420 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TAS2R10Q9NYW0 307 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 MGAT4CQ9UBM8 478 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 MAN2B1O00754 1011 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ARPC1BO15143 372 aaKnown RBP13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 RNGTTO60942 597 aaKnown RBP13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 RDH16O75452 317 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ALDOBP05062 364 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 HOXD11P31277 338 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 LGALS3BPQ08380 585 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ILF3Q12906 894 aaKnown RBP eCLIP13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ASAH1Q13510 395 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 METRNLQ641Q3 311 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 PEX11GQ96HA9 241 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TAPBPLQ9BX59 468 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ENKD1Q9H0I2 346 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TMEM168Q9H0V1 697 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 FGF22Q9HCT0 170 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 FBXL3Q9UKT7 428 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 PPIL1Q9Y3C6 166 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 STAT5AP42229 794 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 EVX1P49640 407 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 EEF1A2Q05639 463 aaKnown RBP13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 HDDC2Q7Z4H3 204 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ZNF511Q8NB15 262 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 OR6N2Q8NGY6 317 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 THAP4Q8WY91 577 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 CNOT9Q92600 299 aaKnown RBP13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TSSK2Q96PF2 358 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SLA2Q9H6Q3 261 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SLC25A19Q9HC21 320 aa13.38□□□□□ -0.27
TNFRSF1B-201ENST00000376259 GXYLT2A0PJZ3 443 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ELOA3DA6NLF2 546 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 M0R233 179 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 HIST1H2ABP04908 130 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 OR3A3P47888 321 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 POU6F2P78424 691 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 REEP5Q00765 189 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ELOA3BQ3SY89 546 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 C4orf46Q504U0 113 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 EIPR1Q53HC9 387 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 C1orf94Q6P1W5 598 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 HIST3H2AQ7L7L0 130 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ELOA3Q8NG57 546 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ABHD4Q8TB40 342 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 HIST1H2ACQ93077 130 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 HYLS1Q96M11 299 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SEMA4CQ9C0C4 833 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SLC23A1Q9UHI7 598 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 PRUNE2Q8WUY3 3088 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SIX6O95475 246 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 PIPP12273 146 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 HOXB2P14652 356 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 RPS5P46782 204 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 EIF1AXP47813 144 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 GDI2P50395 445 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 GPM6BQ13491 265 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 GAS6Q14393 721 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TMEM64Q6YI46 380 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 QSOX2Q6ZRP7 698 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 MEPCEQ7L2J0 689 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 FCRLAQ7L513 359 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 PRSS41Q7RTY9 318 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 PRR22Q8IZ63 422 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ZNF527Q8NB42 609 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 DNAAF1Q8NEP3 725 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 GIMAP1Q8WWP7 306 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 NMNAT3Q96T66 252 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ARHGAP9Q9BRR9 750 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 C1QTNF6Q9BXI9 259 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 A0A0A6YYJ9 748 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 UBE2QL1A1L167 161 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 L7N2F9 121 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SLC19A2O60779 497 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TSPAN9O75954 239 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 F13BP05160 661 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 VEGFBP49765 207 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 GZMKP49863 264 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 GALK2Q01415 458 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 GID4Q8IVV7 300 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 C7orf61Q8IZ16 206 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ELMOD3Q96FG2 381 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 AUNIPQ9H7T9 357 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 MKKSQ9NPJ1 570 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 PRDM9Q9NQV7 894 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 PNO1Q9NRX1 252 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 FKBP14Q9NWM8 211 aa13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ZNF346Q9UL40 294 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1B-201ENST00000376259 C17orf113A0A1B0GUU1 675 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms