RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 TAF1P21675 1872 aa16.05■□□□□ 0.16
MCF2L-203ENST00000375604 USF2Q15853 346 aaPredicted RBP16.05■□□□□ 0.16
MCF2L-203ENST00000375604 RNASE10Q5GAN6 216 aaKnown RBP16.05■□□□□ 0.16
MCF2L-203ENST00000375604 ASB11Q8WXH4 323 aa16.05■□□□□ 0.16
MCF2L-203ENST00000375604 CREB3L1Q96BA8 519 aa16.05■□□□□ 0.16
MCF2L-203ENST00000375604 PRDM9Q9NQV7 894 aa16.05■□□□□ 0.16
MCF2L-203ENST00000375604 MANEAQ5SRI9 462 aa16.05■□□□□ 0.16
MCF2L-203ENST00000375604 SLC16A9Q7RTY1 509 aa16.05■□□□□ 0.16
MCF2L-203ENST00000375604 S100PBPQ96BU1 408 aa16.05■□□□□ 0.16
MCF2L-203ENST00000375604 PLEKHA3Q9HB20 300 aa16.05■□□□□ 0.16
MCF2L-203ENST00000375604 OR7E24Q6IFN5 339 aa16.05■□□□□ 0.16
MCF2L-203ENST00000375604 OR13H1Q8NG92 308 aa16.05■□□□□ 0.16
MCF2L-203ENST00000375604 MYNNQ9NPC7 610 aa16.05■□□□□ 0.16
MCF2L-203ENST00000375604 MBNL1Q9NR56 388 aaKnown RBP16.05■□□□□ 0.16
MCF2L-203ENST00000375604 FAIMQ9NVQ4 179 aa16.05■□□□□ 0.16
MCF2L-203ENST00000375604 DNASE1P24855 282 aa16.05■□□□□ 0.16
MCF2L-203ENST00000375604 RAB4BP61018 213 aa16.05■□□□□ 0.16
MCF2L-203ENST00000375604 TDGQ13569 410 aa16.05■□□□□ 0.16
MCF2L-203ENST00000375604 EIF5AL1Q6IS14 154 aaKnown RBP16.05■□□□□ 0.16
MCF2L-203ENST00000375604 TUBB1Q9H4B7 451 aa16.05■□□□□ 0.16
MCF2L-203ENST00000375604 SDR39U1Q9NRG7 319 aaPredicted RBP16.05■□□□□ 0.16
MCF2L-203ENST00000375604 PCDHGA8Q9Y5G5 932 aa16.05■□□□□ 0.16
MCF2L-203ENST00000375604 WASH4PA8MWX3 477 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 CBX7O95931 251 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 CRABP1P29762 137 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 GPR19Q15760 415 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 NIPAL3Q6P499 406 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 BCDIN3DQ7Z5W3 292 aaKnown RBP16.04■□□□□ 0.16
MCF2L-203ENST00000375604 DCAF13Q9NV06 445 aaKnown RBP16.04■□□□□ 0.16
MCF2L-203ENST00000375604 ARSBP15848 533 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 KIAA1211LQ6NV74 962 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 CCBE1Q6UXH8 406 aaPredicted RBP16.04■□□□□ 0.16
MCF2L-203ENST00000375604 ZNF740Q8NDX6 193 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 SFXN5Q8TD22 340 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 RSC1A1Q92681 617 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 ARSGQ96EG1 525 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 ZNF300Q96RE9 604 aaPredicted RBP16.04■□□□□ 0.16
MCF2L-203ENST00000375604 INTS14Q96SY0 518 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 LINC01553A4QN01 128 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 SPDEFO95238 335 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 CNIH2Q6PI25 160 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 RRNAD1Q96FB5 475 aaKnown RBP16.04■□□□□ 0.16
MCF2L-203ENST00000375604 TUBA1CQ9BQE3 449 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 FKRPQ9H9S5 495 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 GFRA2O00451 464 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 CAV2P51636 162 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 CPZQ66K79 652 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 ZNF534Q76KX8 674 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 TSPYL5Q86VY4 417 aaPredicted RBP16.04■□□□□ 0.16
MCF2L-203ENST00000375604 OR1J4Q8NGS1 313 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 DCUN1D4Q92564 292 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 ZBP1Q9H171 429 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 UGDHO60701 494 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 IGHV3-9P01782 118 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 IL7P13232 177 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 MYF5P13349 255 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 SLC6A8P48029 635 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 PXKQ7Z7A4 578 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 BTBD2Q9BX70 525 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 B3GNT3Q9Y2A9 372 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 GPR45Q9Y5Y3 372 aa16.04■□□□□ 0.16
MCF2L-203ENST00000375604 TMEM202A6NGA9 273 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 KLKB1P03952 638 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 HLA-DMAP28067 261 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 LCN10Q6JVE6 187 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 NDUFAF7Q7L592 441 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 RTN4RL1Q86UN2 441 aaPredicted RBP16.03■□□□□ 0.16
MCF2L-203ENST00000375604 MAFIPQ8WZ33 124 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 TBC1D20Q96BZ9 403 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 OR52D1Q9H346 318 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 HLCSP50747 726 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 CHRDQ9H2X0 955 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 ACKR4Q9NPB9 350 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 SLAMF7Q9NQ25 335 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 AGPAT2O15120 278 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 PRKNO60260 465 aaPredicted RBP16.03■□□□□ 0.16
MCF2L-203ENST00000375604 CAMLGP49069 296 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 WNT4P56705 351 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 GLO1Q04760 184 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 TRIM61Q5EBN2 209 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 COX20Q5RI15 118 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 UNQ6126/PRO20091Q6UXV3 157 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 B3GNT8Q7Z7M8 397 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 MFSD9Q8NBP5 474 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 ZNF420Q8TAQ5 688 aaPredicted RBP16.03■□□□□ 0.16
MCF2L-203ENST00000375604 CLMPQ9H6B4 373 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 HEMK1Q9Y5R4 338 aaPredicted RBP16.03■□□□□ 0.16
MCF2L-203ENST00000375604 SETD1AO15047 1707 aaKnown RBP16.03■□□□□ 0.16
MCF2L-203ENST00000375604 DDX60Q8IY21 1712 aaKnown RBP16.03■□□□□ 0.16
MCF2L-203ENST00000375604 CREBL2O60519 120 aaPredicted RBP16.03■□□□□ 0.16
MCF2L-203ENST00000375604 SMN1Q16637 294 aaKnown RBP16.03■□□□□ 0.16
MCF2L-203ENST00000375604 SLC5A12Q1EHB4 618 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 TMEM189-UBE2V1I3L0A0 370 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 GASTP01350 101 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 PTAFRP25105 342 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 MLF2Q15773 248 aaPredicted RBP16.03■□□□□ 0.16
MCF2L-203ENST00000375604 KRBOX4Q5JUW0 171 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 B3GNT9Q6UX72 402 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 OR8J2Q8NGG1 315 aa16.03■□□□□ 0.16
MCF2L-203ENST00000375604 NRSN2Q9GZP1 204 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms