RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 ELF4Q99607 663 aaPredicted RBP11.17□□□□□ -0.62
HMGCL-202ENST00000374487 ZNF559Q9BR84 538 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 SLC30A2Q9BRI3 323 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 ATP13A2Q9NQ11 1180 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 TXNL4BQ9NX01 149 aaKnown RBP11.17□□□□□ -0.62
HMGCL-202ENST00000374487 TOR4AQ9NXH8 423 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 MED31Q9Y3C7 131 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 LRP4O75096 1905 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 SPAARA0A1B0GVQ0 90 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 LOC110117498-PIK3R3F6TDL0 507 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 CTNSO60931 367 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 CDRT1O95170 752 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 PROS1P07225 676 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 HTR1FP30939 366 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 SLC1A3P43003 542 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 PSG6Q00889 435 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 ERV3-1Q14264 604 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 PRTGQ2VWP7 1150 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 PDZK1Q5T2W1 519 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 CXXC5Q7LFL8 322 aaKnown RBP11.17□□□□□ -0.62
HMGCL-202ENST00000374487 ZAR1Q86SH2 424 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 FAM83FQ8NEG4 500 aaPredicted RBP11.17□□□□□ -0.62
HMGCL-202ENST00000374487 BBS1Q8NFJ9 593 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 BRIX1Q8TDN6 353 aaKnown RBP11.17□□□□□ -0.62
HMGCL-202ENST00000374487 GRHL3Q8TE85 626 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 TM9SF4Q92544 642 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.17□□□□□ -0.62
HMGCL-202ENST00000374487 FOLH1BQ9HBA9 442 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 SMURF1Q9HCE7 757 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 ISYNA1Q9NPH2 558 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 C20orf141Q9NUB4 165 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 CBLCQ9ULV8 474 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 TMEM5Q9Y2B1 443 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 PCDHGB6Q9Y5F9 930 aa11.17□□□□□ -0.62
HMGCL-202ENST00000374487 A0A1B0GTQ1 180 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 FAM183AA6NL82 134 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 PLD2O14939 933 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 RCBTB2O95199 551 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 LIMS3P0CW19 117 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 LIMS4P0CW20 117 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 ATXN8OSP0DMR3 200 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 FUT1P19526 365 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 MAKP20794 623 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 DRD5P21918 477 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 PAICSP22234 425 aaKnown RBP11.16□□□□□ -0.62
HMGCL-202ENST00000374487 SSTR4P31391 388 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 CAPZBP47756 277 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 FASLGP48023 281 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 MAT1AQ00266 395 aaKnown RBP11.16□□□□□ -0.62
HMGCL-202ENST00000374487 TPBGQ13641 420 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 ZNF267Q14586 743 aaPredicted RBP11.16□□□□□ -0.62
HMGCL-202ENST00000374487 AMZ1Q400G9 498 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 CRTC2Q53ET0 693 aaPredicted RBP11.16□□□□□ -0.62
HMGCL-202ENST00000374487 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.16□□□□□ -0.62
HMGCL-202ENST00000374487 SLC35F1Q5T1Q4 408 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 RPL13AP3Q6NVV1 102 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 PLBD1Q6P4A8 553 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 ZNF613Q6PF04 617 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 CCDC190Q86UF4 302 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 ZNF595Q8IYB9 648 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 SLC25A45Q8N413 288 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 ARHGEF39Q8N4T4 335 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 CNOT9Q92600 299 aaKnown RBP11.16□□□□□ -0.62
HMGCL-202ENST00000374487 ARSGQ96EG1 525 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 KCTD7Q96MP8 289 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 DGAT2Q96PD7 388 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 SECISBP2Q96T21 854 aaKnown RBP11.16□□□□□ -0.62
HMGCL-202ENST00000374487 ARHGAP9Q9BRR9 750 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 BARHL1Q9BZE3 327 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 PRTFDC1Q9NRG1 225 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 SOHLH2Q9NX45 425 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 TNFRSF10DQ9UBN6 386 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 ZNF223Q9UK11 482 aaPredicted RBP11.16□□□□□ -0.62
HMGCL-202ENST00000374487 GSTK1Q9Y2Q3 226 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 FOXS1O43638 330 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 CER1O95813 267 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 IL1AP01583 271 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 ZGLP1P0C6A0 271 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 S1PR1P21453 382 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 TNFSF8P32971 234 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 ETV6P41212 452 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 EMDP50402 254 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 PGDP52209 483 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 TBC1D25Q3MII6 688 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 GID4Q8IVV7 300 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 KLHL36Q8N4N3 616 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 PSD4Q8NDX1 1056 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 OR4N2Q8NGD1 307 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 SAP25Q8TEE9 199 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 HTRA1Q92743 480 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 MMABQ96EY8 250 aaPredicted RBP11.16□□□□□ -0.62
HMGCL-202ENST00000374487 TM9SF2Q99805 663 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 NEURL2Q9BR09 285 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 LMF2Q9BU23 707 aaKnown RBP11.16□□□□□ -0.62
HMGCL-202ENST00000374487 IFT27Q9BW83 186 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 EVA1AQ9H8M9 152 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 SP140LQ9H930 580 aa11.16□□□□□ -0.62
HMGCL-202ENST00000374487 HINT3Q9NQE9 182 aaKnown RBP11.16□□□□□ -0.62
HMGCL-202ENST00000374487 SPTBN2O15020 2390 aa11.15□□□□□ -0.62
HMGCL-202ENST00000374487 TP53BP1Q12888 1972 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms