RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 RASSF5Q8WWW0 418 aa10.02□□□□□ -0.8
CXCL12-203ENST00000374429 ZFP3Q96NJ6 502 aa10.02□□□□□ -0.8
CXCL12-203ENST00000374429 CD180Q99467 661 aa10.02□□□□□ -0.8
CXCL12-203ENST00000374429 HDHD2Q9H0R4 259 aa10.02□□□□□ -0.8
CXCL12-203ENST00000374429 LMAN2LQ9H0V9 348 aa10.02□□□□□ -0.8
CXCL12-203ENST00000374429 OR52D1Q9H346 318 aa10.02□□□□□ -0.8
CXCL12-203ENST00000374429 TNFRSF10DQ9UBN6 386 aa10.02□□□□□ -0.8
CXCL12-203ENST00000374429 A0A0B4J203 849 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 DUXAA6NLW8 204 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 POLR1CO15160 346 aaPredicted RBP10.02□□□□□ -0.81
CXCL12-203ENST00000374429 GPR75O95800 540 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 SPNP16150 400 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 TAGLNQ01995 201 aaKnown RBP10.02□□□□□ -0.81
CXCL12-203ENST00000374429 ZNF33BQ06732 778 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 IL18Q14116 193 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 SSX1Q16384 188 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 TP53I3Q53FA7 332 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 STEAP3Q658P3 488 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 FIP1L1Q6UN15 594 aaKnown RBP10.02□□□□□ -0.81
CXCL12-203ENST00000374429 FRRS1Q6ZNA5 592 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 RANBP3LQ86VV4 465 aaPredicted RBP10.02□□□□□ -0.81
CXCL12-203ENST00000374429 PARP16Q8N5Y8 322 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 CELF2-AS1Q8N7Q2 184 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 KBTBD8Q8NFY9 601 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 OR52I1Q8NGK6 324 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 OR4C6Q8NH72 309 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 SPRYD4Q8WW59 207 aaPredicted RBP10.02□□□□□ -0.81
CXCL12-203ENST00000374429 MS4A4EQ96PG1 132 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 NELL2Q99435 816 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 GPN2Q9H9Y4 310 aaPredicted RBP10.02□□□□□ -0.81
CXCL12-203ENST00000374429 HHATLQ9HCP6 504 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 MRPL15Q9P015 296 aaKnown RBP10.02□□□□□ -0.81
CXCL12-203ENST00000374429 MMP17Q9ULZ9 603 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 A0A0G2JPF8 293 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 HNRNPCL2B2RXH8 293 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 HNRNPCL3B7ZW38 293 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 GPANK1O95872 356 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 HNRNPCL4P0DMR1 293 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 MAKP20794 623 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 TGFBR2P37173 567 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 SOX2P48431 317 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 NSDHLQ15738 373 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 THSD4Q6ZMP0 1018 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 RASGRP3Q8IV61 690 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 IZUMO1Q8IYV9 350 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 OR4Q3Q8NH05 313 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 LRRC20Q8TCA0 184 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 PRRC1Q96M27 445 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 DCLRE1CQ96SD1 692 aaKnown RBP10.02□□□□□ -0.81
CXCL12-203ENST00000374429 C19orf43Q9BQ61 176 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 MROQ9BYG7 248 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 SMOC1Q9H4F8 434 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 THSD1Q9NS62 852 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 MAN2C1Q9NTJ4 1040 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 NKIRAS2Q9NYR9 191 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 MYEF2Q9P2K5 600 aaKnown RBP10.02□□□□□ -0.81
CXCL12-203ENST00000374429 REV1Q9UBZ9 1251 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 FTSJ1Q9UET6 329 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 PHF11Q9UIL8 331 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 MKL2Q9ULH7 1088 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 DNAJC13O75165 2243 aa10.02□□□□□ -0.81
CXCL12-203ENST00000374429 A0A1W2PQL4 384 aaPredicted RBP10.01□□□□□ -0.81
CXCL12-203ENST00000374429 CLDN4O14493 209 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 APBB3O95704 486 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 LALBAP00709 142 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 SEMG1P04279 462 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 IFNGR2P38484 337 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 ERVK-25P63136 954 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 KIR2DS3Q14952 304 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 ZNF425Q6IV72 752 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 TMPRSS11AQ6ZMR5 421 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 WDR88Q6ZMY6 472 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 RTL10Q7L3V2 364 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 CXXC5Q7LFL8 322 aaKnown RBP10.01□□□□□ -0.81
CXCL12-203ENST00000374429 SLC46A3Q7Z3Q1 461 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 CDH24Q86UP0 819 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 GPR135Q8IZ08 494 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 SMRP1Q8NCR6 262 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 DYNC2LI1Q8TCX1 351 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 YIPF6Q96EC8 236 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 CDCA3Q99618 268 aaPredicted RBP10.01□□□□□ -0.81
CXCL12-203ENST00000374429 MTHFD2LQ9H903 347 aaPredicted RBP10.01□□□□□ -0.81
CXCL12-203ENST00000374429 HINT3Q9NQE9 182 aaKnown RBP10.01□□□□□ -0.81
CXCL12-203ENST00000374429 FLRT3Q9NZU0 649 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 KCNE5Q9UJ90 142 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 CUL9Q8IWT3 2517 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 TRIM64A6NGJ6 449 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 TVP23AA6NH52 213 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 TRIM64BA6NI03 449 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 CENPXA8MT69 81 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 HCRTR2O43614 444 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 OR5F1O95221 314 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 PAHP00439 452 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 NAGAP17050 411 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 CD38P28907 300 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 EIF2DP41214 584 aaKnown RBP10.01□□□□□ -0.81
CXCL12-203ENST00000374429 CBX5P45973 191 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 IRAK1BP1Q5VVH5 260 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 OR6Q1Q8NGQ2 317 aa10.01□□□□□ -0.81
CXCL12-203ENST00000374429 TMEM239Q8WW34 195 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms