RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 GIMAP4Q9NUV9 329 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 DLL3Q9NYJ7 618 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 MAT2BQ9NZL9 334 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 FOXJ2Q9P0K8 574 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 ZNF282Q9UDV7 671 aaPredicted RBP3.28□□□□□ -1.88
MCF2-202ENST00000370573 ZNF639Q9UID6 485 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 OAZ3Q9UMX2 235 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 MRPS33Q9Y291 106 aaKnown RBP3.28□□□□□ -1.88
MCF2-202ENST00000370573 MMACHCQ9Y4U1 282 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 KCNE3Q9Y6H6 103 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 AKAP13Q12802 2813 aa3.28□□□□□ -1.88
MCF2-202ENST00000370573 A0A1W2PQ09 198 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 EVPLLA8MZ36 301 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 FAM220BPB1ANY3 271 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 CLDN4O14493 209 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 ENTPD5O75356 428 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 CIB2O75838 187 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 BCAS2O75934 225 aaPredicted RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 PSMG1O95456 288 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 CLPSP04118 112 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 CDK4P11802 303 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 CEACAM1P13688 526 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 GGT1P19440 569 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 ATP6V1B2P21281 511 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 NT5EP21589 574 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 IL10P22301 178 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 HTR1EP28566 365 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 CHI3L1P36222 383 aaPredicted RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 CRATP43155 626 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 NOVA1P51513 510 aaKnown RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 PRKAG1P54619 331 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 ACTR3P61158 418 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 STX4Q12846 297 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 TRAP1Q12931 704 aaKnown RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 CHAF1BQ13112 559 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 TP53BP2Q13625 1128 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 SPDYE7PQ495Y7 208 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 DCAF12Q5T6F0 453 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 WLSQ5T9L3 541 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 C1orf146Q5VVC0 180 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 MLIPQ5VWP3 458 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 TNFAIP8L2Q6P589 184 aaPredicted RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 FAM198BQ6UWH4 519 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 QSOX2Q6ZRP7 698 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 OLIG3Q7RTU3 272 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 WDR53Q7Z5U6 358 aaPredicted RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 MICU2Q8IYU8 434 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 SAMD14Q8IZD0 417 aaPredicted RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 ST13P4Q8IZP2 240 aaPredicted RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 OR2L13Q8N349 312 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 TRIML2Q8N7C3 387 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 ZNF321PQ8N8H1 164 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 ZBTB8BQ8NAP8 495 aaPredicted RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 OR2T12Q8NG77 320 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 WDR36Q8NI36 951 aaKnown RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 FAM110BQ8TC76 370 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 ZNF675Q8TD23 568 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 RAB8BQ92930 207 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 MR1Q95460 341 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 MAL2Q969L2 176 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 OTUB1Q96FW1 271 aaPredicted RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 REXO5Q96IC2 774 aaKnown RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 LRFN5Q96NI6 719 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 DDA1Q9BW61 102 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 RSPO3Q9BXY4 272 aaPredicted RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 ULBP3Q9BZM4 244 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 SLC26A1Q9H2B4 701 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 UNKLQ9H9P5 680 aaKnown RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 SEC61A2Q9H9S3 476 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 PNO1Q9NRX1 252 aaKnown RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 ZCCHC3Q9NUD5 404 aaKnown RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 TAS2R10Q9NYW0 307 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 AKAP7Q9P0M2 348 aaPredicted RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 SLC25A10Q9UBX3 287 aaPredicted RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 SATB2Q9UPW6 733 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 TMEM5Q9Y2B1 443 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 NUP210LQ5VU65 1888 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 AHCTF1Q8WYP5 2266 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 SDK2Q58EX2 2172 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 PTPRBP23467 1997 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 IGHV3-20A0A0C4DH32 117 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 ELOVL7A1L3X0 281 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 FAM90A7PA6NKC0 464 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 FAM90A22PA8MWA6 464 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 FAM90A12PA8MX19 464 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 FAM90A23PA8MXZ1 464 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 C17orf105B2RV13 164 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 IDSB3KWA1 339 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 HMGN4O00479 90 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 ARPC2O15144 300 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 HNRNPRO43390 633 aaKnown RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 MGRN1O60291 552 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 OR10H2O60403 315 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 KLF7O75840 302 aaPredicted RBP3.27□□□□□ -1.89
MCF2-202ENST00000370573 STK17BO94768 372 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 TNFSF15O95150 251 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 KRT75O95678 551 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 DDAH2O95865 285 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 FSHBP01225 129 aa3.27□□□□□ -1.89
MCF2-202ENST00000370573 HMGN2P05204 90 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms