RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 CELSR2Q9HCU4 2923 aa8.87□□□□□ -0.99
CD48-202ENST00000368046 DNAJC13O75165 2243 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 A0A096LPI6 279 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 A0A0G2JND7 137 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 CENPVL1A0A0U1RR11 272 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 A0A1W2PP18 115 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 AGAP5A6NIR3 686 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 SLC22A20A6NK97 555 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 ETV2O00321 342 aaPredicted RBP8.86□□□□□ -0.99
CD48-202ENST00000368046 EIF1AYO14602 144 aaKnown RBP8.86□□□□□ -0.99
CD48-202ENST00000368046 EFNA2O43921 213 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 CYP7B1O75881 506 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 OPN1LWP04000 364 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 ETFAP13804 333 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 IL7RP16871 459 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 PRKCAP17252 672 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 PGCP20142 388 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 ME2P23368 584 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 PGM1P36871 562 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 PEX19P40855 299 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 AGFG1P52594 562 aaKnown RBP8.86□□□□□ -0.99
CD48-202ENST00000368046 HPCAP84074 193 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 SKP2Q13309 424 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 GNA13Q14344 377 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 RGNQ15493 299 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 MAPK11Q15759 364 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 TOMM34Q15785 309 aaPredicted RBP8.86□□□□□ -0.99
CD48-202ENST00000368046 FBXL19-AS1Q494R0 122 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 GTDC1Q4AE62 458 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 PAGE3Q5JUK9 113 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 LRIF1Q5T3J3 769 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 PLXDC2Q6UX71 529 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 CMIPQ8IY22 773 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 ZNF295-AS1Q8N0V1 137 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 RELL2Q8NC24 303 aaPredicted RBP8.86□□□□□ -0.99
CD48-202ENST00000368046 TSPEARQ8WU66 669 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 TMEM234Q8WY98 164 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 SMPDL3BQ92485 455 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 FIG4Q92562 907 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 OSTF1Q92882 214 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 INTS12Q96CB8 462 aaKnown RBP8.86□□□□□ -0.99
CD48-202ENST00000368046 AURKBQ96GD4 344 aaPredicted RBP8.86□□□□□ -0.99
CD48-202ENST00000368046 ADGRG7Q96K78 797 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 SFXN3Q9BWM7 321 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 PINK1Q9BXM7 581 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 PRRG4Q9BZD6 226 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 RAD21L1Q9H4I0 556 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 CALML5Q9NZT1 146 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 JKAMPQ9P055 326 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 SLAMF8Q9P0V8 285 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 ZNF232Q9UNY5 417 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 NDUFAF1Q9Y375 327 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 L3MBTL1Q9Y468 752 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 ZNF175Q9Y473 711 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 GMEB1Q9Y692 573 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 CENPEQ02224 2701 aa8.86□□□□□ -0.99
CD48-202ENST00000368046 NBPF19A0A087WUL8 3843 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 A0A0G2JPF8 293 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 A0A0J9YW62 118 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 TMEM247A6NEH6 219 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 GJE1A6NN92 205 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 A8MXE2 369 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 HNRNPCL2B2RXH8 293 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 HNRNPCL3B7ZW38 293 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 HNRNPCL1O60812 293 aaKnown RBP8.85□□□□□ -0.99
CD48-202ENST00000368046 NTN1O95631 604 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 DBIP07108 87 aaKnown RBP8.85□□□□□ -0.99
CD48-202ENST00000368046 CHRM4P08173 479 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 UBTFL6P0CB48 400 aaPredicted RBP8.85□□□□□ -0.99
CD48-202ENST00000368046 HNRNPCL4P0DMR1 293 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 TROVE2P10155 538 aaKnown RBP eCLIP8.85□□□□□ -0.99
CD48-202ENST00000368046 PRF1P14222 555 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 HOXB9P17482 250 aaPredicted RBP8.85□□□□□ -0.99
CD48-202ENST00000368046 CAPN3P20807 821 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 IL11P20809 199 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 ELK4P28324 431 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 EIF1AXP47813 144 aaKnown RBP8.85□□□□□ -0.99
CD48-202ENST00000368046 ASCL1P50553 236 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 ARFIP2P53365 341 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 CRISP3P54108 245 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 DLX5P56178 289 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 CARD18P57730 90 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 SESN3P58005 492 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 DSTNP60981 165 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 GUCY1A3Q02108 690 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 FADDQ13158 208 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 PON3Q15166 354 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 QPRTQ15274 297 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 CTU2Q2VPK5 515 aaKnown RBP8.85□□□□□ -0.99
CD48-202ENST00000368046 NDUFAF6Q330K2 333 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 GTF2IRD2BQ6EKJ0 949 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 DNAJC14Q6Y2X3 702 aaPredicted RBP8.85□□□□□ -0.99
CD48-202ENST00000368046 GTF2IRD2Q86UP8 949 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 TMCO5AQ8N6Q1 288 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 FAM71CQ8NEG0 241 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 OR10D3Q8NH80 312 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 OR2V1Q8NHB1 315 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 FNDC9Q8TBE3 224 aa8.85□□□□□ -0.99
CD48-202ENST00000368046 SLC38A5Q8WUX1 472 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms