RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 A0A0X1KG70 313 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 IGLON5A6NGN9 336 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 VEGFDO43915 354 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 HPGDSO60760 199 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 TMEM127O75204 238 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 SH3BGRLO75368 114 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 ITGA10O75578 1167 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 RGS9O75916 674 aaPredicted RBP10.7□□□□□ -0.7
USF1-201ENST00000368019 IGFBP1P08833 259 aaPredicted RBP10.7□□□□□ -0.7
USF1-201ENST00000368019 PLA2G2AP14555 144 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 XPAP23025 273 aaPredicted RBP10.7□□□□□ -0.7
USF1-201ENST00000368019 FPR3P25089 353 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 HTR1FP30939 366 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 ETV3P41162 512 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 RABIFP47224 123 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 TGM4P49221 684 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 CASP9P55211 416 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 CDH11P55287 796 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 CXADRP78310 365 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 ST3GAL3Q11203 375 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 ZNF155Q12901 538 aaPredicted RBP10.7□□□□□ -0.7
USF1-201ENST00000368019 EIF2B5Q13144 721 aaKnown RBP10.7□□□□□ -0.7
USF1-201ENST00000368019 CEP78Q5JTW2 689 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 ZBTB37Q5TC79 503 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 OR2G6Q5TZ20 316 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 WDR53Q7Z5U6 358 aaPredicted RBP10.7□□□□□ -0.7
USF1-201ENST00000368019 PARGQ86W56 976 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 C17orf64Q86WR6 236 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 KIF18BQ86Y91 864 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 GID4Q8IVV7 300 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 DCUN1D3Q8IWE4 304 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 ADGRF3Q8IZF5 1079 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 IQCF1Q8N6M8 205 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 LRRC17Q8N6Y2 441 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 OR5H6Q8NGV6 325 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 PIGXQ8TBF5 258 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 RFT1Q96AA3 541 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 RAB7BQ96AH8 199 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 WBP1Q96G27 269 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 COQ10AQ96MF6 247 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 CMTM3Q96MX0 182 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 ZNF649Q9BS31 505 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 RSPO3Q9BXY4 272 aaPredicted RBP10.7□□□□□ -0.7
USF1-201ENST00000368019 MFRPQ9BY79 579 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 RNF32Q9H0A6 362 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 OR51I1Q9H343 314 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 SERHL2Q9H4I8 314 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 DDX31Q9H8H2 851 aaKnown RBP10.7□□□□□ -0.7
USF1-201ENST00000368019 B3GAT2Q9NPZ5 323 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 IL20Q9NYY1 176 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 NLKQ9UBE8 527 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 COMMD3Q9UBI1 195 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 NUBP2Q9Y5Y2 271 aa10.7□□□□□ -0.7
USF1-201ENST00000368019 ARHGEF17Q96PE2 2063 aaPredicted RBP10.69□□□□□ -0.7
USF1-201ENST00000368019 LINC00854A0A1B0GVQ3 168 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 C12orf71A8MTZ7 269 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 B4GALT2O60909 372 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 CLEC3AO75596 197 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 RPN2P04844 631 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 TPOP07202 933 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 FHP07954 510 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 NR2F1P10589 423 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 F8A1P23610 371 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 PDHA2P29803 388 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 TALDO1P37837 337 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 UCNP55089 124 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 TAS2R43P59537 309 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 CFHR1Q03591 330 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 DPTQ07507 201 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 BAMBIQ13145 260 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 PIN1Q13526 163 aaPredicted RBP10.69□□□□□ -0.7
USF1-201ENST00000368019 P2RY14Q15391 338 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 DECR1Q16698 335 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 TYW3Q6IPR3 259 aaKnown RBP10.69□□□□□ -0.7
USF1-201ENST00000368019 PYHIN1Q6K0P9 492 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 GUSBP11Q6P575 273 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 RFPL4BQ6ZWI9 263 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 SPERTQ8NA61 448 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 TEX19Q8NA77 164 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 SYT14Q8NB59 555 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 SLC37A3Q8NCC5 494 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 TTLQ8NG68 377 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 OR4M1Q8NGD0 313 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 OR56A1Q8NGH5 318 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 OR2L2Q8NH16 312 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 DIO2Q92813 273 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 RGMAQ96B86 450 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 SLC46A1Q96NT5 459 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 FAIM2Q9BWQ8 316 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 DPH1Q9BZG8 443 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 ABCG4Q9H172 646 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 DPAGT1Q9H3H5 408 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 C12orf10Q9HB07 376 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 KRCC1Q9NPI7 259 aaPredicted RBP10.69□□□□□ -0.7
USF1-201ENST00000368019 EVA1BQ9NVM1 165 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 MCUBQ9NWR8 336 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 ENTPD4Q9Y227 616 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 YARS2Q9Y2Z4 477 aaKnown RBP10.69□□□□□ -0.7
USF1-201ENST00000368019 ENTPD2Q9Y5L3 495 aa10.69□□□□□ -0.7
USF1-201ENST00000368019 DNMT3AQ9Y6K1 912 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms