RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 CPNE5Q9HCH3 593 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 OLAHQ9NV23 265 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 EXTL2Q9UBQ6 330 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 NDRG4Q9ULP0 352 aaKnown RBP8.13□□□□□ -1.11
SYNE1-206ENST00000367253 PPM1HQ9ULR3 514 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 TMEM8BA6NDV4 472 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 PEX10O60683 326 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 OPN1MWP04001 364 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 H2AFB2P0C5Z0 115 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 OPN1MW2P0DN77 364 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 OPN1MW3P0DN78 364 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 CD79AP11912 226 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 BCKDHAP12694 445 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 ZNF43P17038 809 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 FASLGP48023 281 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 MARCKSL1P49006 195 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 NFATC3Q12968 1075 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 IKZF1Q13422 519 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 ST3GAL2Q16842 350 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 FCRL6Q6DN72 434 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 Q7L0L9 218 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 MRPL21Q7Z2W9 205 aaKnown RBP8.13□□□□□ -1.11
SYNE1-206ENST00000367253 CANT1Q8WVQ1 401 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 GLYATL1Q969I3 302 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 TECTBQ96PL2 329 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 IL4I1Q96RQ9 567 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 ZFYVE21Q9BQ24 234 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 ZNF436Q9C0F3 470 aaPredicted RBP8.13□□□□□ -1.11
SYNE1-206ENST00000367253 FBXW11Q9UKB1 542 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 TIMM22Q9Y584 194 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 SNX10Q9Y5X0 201 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 MRPL33O75394 65 aaKnown RBP8.13□□□□□ -1.11
SYNE1-206ENST00000367253 DTYMKP23919 212 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 PITPNBP48739 271 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 CLCQ05315 142 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 PCGF3Q3KNV8 242 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 TMEM119Q4V9L6 283 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 GPR157Q5UAW9 335 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 OR52E8Q6IFG1 317 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 SLC51AQ86UW1 340 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 CATSPERDQ86XM0 798 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 METTL27Q8N6F8 245 aaPredicted RBP8.13□□□□□ -1.11
SYNE1-206ENST00000367253 SIMC1Q8NDZ2 872 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 IL17RDQ8NFM7 739 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 FCAMRQ8WWV6 532 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 NTAN1Q96AB6 310 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 MAPKAP1Q9BPZ7 522 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 RBCK1Q9BYM8 510 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 ZNF430Q9H8G1 570 aaPredicted RBP8.13□□□□□ -1.11
SYNE1-206ENST00000367253 ZNF358Q9NW07 568 aa8.13□□□□□ -1.11
SYNE1-206ENST00000367253 SNED1Q8TER0 1413 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 LOC100130705A0A1B0GUX0 176 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 TMEM72A0PK05 275 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 DSCR3O14972 297 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 MBTPS2O43462 519 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 SFTPBP07988 381 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 ITGA5P08648 1049 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 PRSS56P0CW18 603 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 FECHP22830 423 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 APEX1P27695 318 aaKnown RBP8.12□□□□□ -1.11
SYNE1-206ENST00000367253 SLC5A2P31639 672 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 P2RY2P41231 377 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 COMPP49747 757 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-206ENST00000367253 TOMM34Q15785 309 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-206ENST00000367253 NAA40Q86UY6 237 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 JAGN1Q8N5M9 183 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 FKBP10Q96AY3 582 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 BPIFA2Q96DR5 249 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 ZNF578Q96N58 590 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-206ENST00000367253 SMOC2Q9H3U7 446 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 SEMA4GQ9NTN9 838 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 COL20A1Q9P218 1284 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 NME7Q9Y5B8 376 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 MYH7P12883 1935 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 TRAPPC13A5PLN9 417 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 ABCD4O14678 606 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 TBX19O60806 448 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 RASAL1O95294 804 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 CBX7O95931 251 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 PTTG1O95997 202 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 GKP32189 559 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 GPR143P51810 404 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 TAS2R43P59537 309 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 B2MP61769 119 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 SPIN4Q56A73 249 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 CST9Q5W186 159 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 JMJD6Q6NYC1 403 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-206ENST00000367253 FAM122BQ7Z309 247 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 SCML4Q8N228 414 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 TMBIM1Q969X1 311 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 C3orf30Q96M34 536 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 MICU1Q9BPX6 476 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 GATA5Q9BWX5 397 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-206ENST00000367253 PCDHAC1Q9H158 963 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 METTL9Q9H1A3 318 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 LIPGQ9Y5X9 500 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 CHD4Q14839 1912 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 AKAP11Q9UKA4 1901 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 SERTM1A2A2V5 107 aa8.12□□□□□ -1.11
SYNE1-206ENST00000367253 AP1G1O43747 822 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms