RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 VN1R3Q9BXE9 311 aa14.74□□□□□ -0.05
NUCKS1-201ENST00000367142 NOSIPQ9Y314 301 aaKnown RBP14.74□□□□□ -0.05
NUCKS1-201ENST00000367142 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.74□□□□□ -0.05
NUCKS1-201ENST00000367142 SEC14L2O76054 403 aa14.74□□□□□ -0.05
NUCKS1-201ENST00000367142 APOC3P02656 99 aa14.74□□□□□ -0.05
NUCKS1-201ENST00000367142 OPN1LWP04000 364 aa14.74□□□□□ -0.05
NUCKS1-201ENST00000367142 PRSS56P0CW18 603 aa14.74□□□□□ -0.05
NUCKS1-201ENST00000367142 HLCSP50747 726 aa14.74□□□□□ -0.05
NUCKS1-201ENST00000367142 SH3BP2P78314 561 aa14.74□□□□□ -0.05
NUCKS1-201ENST00000367142 TMEFF1Q8IYR6 380 aa14.74□□□□□ -0.05
NUCKS1-201ENST00000367142 PGAP3Q96FM1 320 aaPredicted RBP14.74□□□□□ -0.05
NUCKS1-201ENST00000367142 PRRC1Q96M27 445 aa14.74□□□□□ -0.05
NUCKS1-201ENST00000367142 SLC19A3Q9BZV2 496 aa14.74□□□□□ -0.05
NUCKS1-201ENST00000367142 ZNF443Q9Y2A4 671 aaPredicted RBP14.74□□□□□ -0.05
NUCKS1-201ENST00000367142 MED16Q9Y2X0 877 aa14.74□□□□□ -0.05
NUCKS1-201ENST00000367142 TOR1AO14656 332 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 WNT11O96014 354 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 DCTP40126 519 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 MRPS10P82664 201 aaKnown RBP14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 ZP2Q05996 745 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 EXOSC7Q15024 291 aaKnown RBP14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 SYNPRQ8TBG9 265 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 RLN3Q8WXF3 142 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 HHLA2Q9UM44 414 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 ZNF891A8MT65 544 aaPredicted RBP14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 SLC16A7O60669 478 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 SCAF4O95104 1147 aaKnown RBP14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 HOXD13P35453 343 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 LGALS4P56470 323 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 DUSP7Q16829 419 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 ZNF684Q5T5D7 378 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 ZC3H3Q8IXZ2 948 aaKnown RBP14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 ARL11Q969Q4 196 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 TMEM45AQ9NWC5 275 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 E7ESA3 106 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 OLFM2O95897 454 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 F3P13726 295 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 HOXA1P49639 335 aaPredicted RBP14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 GK2Q14410 553 aaPredicted RBP14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 NPWQ8N729 165 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 CD200R1Q8TD46 325 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 C1QTNF2Q9BXJ5 285 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 ASF1BQ9NVP2 202 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 AP1G1O43747 822 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 PIP5K1CO60331 668 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 PIN1Q13526 163 aaPredicted RBP14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 MPEG1Q2M385 716 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 CLVS2Q5SYC1 327 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 BPIFA2Q96DR5 249 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 SLC6A20Q9NP91 592 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 ITGB2P05107 769 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 HSD17B1P14061 328 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 TNFRSF1BP20333 461 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 TACR3P29371 465 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 HOXA11P31270 313 aaPredicted RBP14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 POU3F1Q03052 451 aaPredicted RBP14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 TMEM71Q6P5X7 295 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 DMBX1Q8NFW5 382 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 NEIL2Q969S2 332 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 UBL7Q96S82 380 aaPredicted RBP14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 UHRF1Q96T88 793 aaPredicted RBP14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 OR2B2Q9GZK3 357 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 ZNF286AQ9HBT8 521 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 CPMP14384 443 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 YPEL5P62699 121 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 P2RY14Q15391 338 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 METTL11BQ5VVY1 283 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 BOD1Q96IK1 185 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 SORCS2Q96PQ0 1159 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 KCND3Q9UK17 655 aa14.73□□□□□ -0.05
NUCKS1-201ENST00000367142 HTR6P50406 440 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 PPP5CP53041 499 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 DCDP81605 110 aaKnown RBP14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 SQSTM1Q13501 440 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 MOGSQ13724 837 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 LTB4RQ15722 352 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 PIP5KL1Q5T9C9 394 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 ZNF595Q8IYB9 648 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 TTC9BQ8N6N2 239 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 AK6Q9Y3D8 172 aaKnown RBP14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 UBR1Q8IWV7 1749 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 CSNK1DP48730 415 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 SLC36A2Q495M3 483 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 ISCA2Q86U28 154 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 MISPQ8IVT2 679 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 MFSD6LQ8IWD5 586 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 GDPD1Q8N9F7 314 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 ACBD4Q8NC06 268 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 GPR26Q8NDV2 337 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 SGK3Q96BR1 496 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 ZNF845Q96IR2 970 aaPredicted RBP14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 ATP6V1G1O75348 118 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 CPT2P23786 658 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 SSTP61278 116 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 OR52W1Q6IF63 320 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 BRICD5Q6PL45 260 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 FAM57BQ71RH2 274 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 PM20D2Q8IYS1 436 aa14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 MRPL43Q8N983 215 aaKnown RBP14.72□□□□□ -0.05
NUCKS1-201ENST00000367142 THSD1Q9NS62 852 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms