RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 IFT27Q9BW83 186 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.61□□□□□ -0.39
PRKN-205ENST00000366897 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.61□□□□□ -0.39
PRKN-205ENST00000366897 PRR23AA6NEV1 266 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 TRABD2BA6NFA1 517 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 KLF4O43474 513 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 IFNA7P01567 189 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 ALDOBP05062 364 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 DRD2P14416 443 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 RAB3BP20337 219 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 ID2Q02363 134 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 BTN1A1Q13410 526 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 GALEQ14376 348 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 KIAA1324Q6UXG2 1013 aaKnown RBP12.61□□□□□ -0.39
PRKN-205ENST00000366897 KREMEN2Q8NCW0 462 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 OR2T4Q8NH00 348 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 OR5K2Q8NHB8 316 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 RPLP0P6Q8NHW5 317 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 DERL3Q96Q80 235 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 FERD3LQ96RJ6 166 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 MENTQ9BUN1 341 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 PELI2Q9HAT8 420 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 WASH6PQ9NQA3 447 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 KLHL28Q9NXS3 571 aa12.61□□□□□ -0.39
PRKN-205ENST00000366897 ARID1BQ8NFD5 2236 aaPredicted RBP12.6□□□□□ -0.39
PRKN-205ENST00000366897 NOTCH4Q99466 2003 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 MEIKINA0A087WXM9 373 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 TEX51A0A1B0GUA7 166 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 A0A1W2PPL8 197 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 M0R233 179 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 NFATC1O95644 943 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 SULT1A3P0DMM9 295 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 SULT1A4P0DMN0 295 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 F8A1P23610 371 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 BLVRAP53004 296 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 CLDN12P56749 244 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 NRSN1Q8IZ57 195 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 DEFB123Q8N688 67 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 ZBTB44Q8NCP5 570 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 NDC1Q9BTX1 674 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 RCE1Q9Y256 329 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 AUP1Q9Y679 476 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 OR52A4PA6NMU1 304 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 SLC9A3R1O14745 358 aaPredicted RBP12.6□□□□□ -0.39
PRKN-205ENST00000366897 SLC34A2O95436 690 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 MT-ND5P03915 603 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 FCER2P06734 321 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 RAB14P61106 215 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 DECR1Q16698 335 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 SLC51BQ86UW2 128 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 ZNF671Q8TAW3 534 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 ADAMTS15Q8TE58 950 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 ADAMTS14Q8WXS8 1223 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 ELP4Q96EB1 424 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 LINC00052Q96N35 136 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 TEAD3Q99594 435 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 C20orf85Q9H1P6 137 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 MTIF3Q9H2K0 278 aaKnown RBP12.6□□□□□ -0.39
PRKN-205ENST00000366897 SIDT1Q9NXL6 827 aaKnown RBP12.6□□□□□ -0.39
PRKN-205ENST00000366897 HCN3Q9P1Z3 774 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 USP36Q9P275 1121 aaKnown RBP12.6□□□□□ -0.39
PRKN-205ENST00000366897 PLEKHM1Q9Y4G2 1056 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 OR1A2Q9Y585 309 aa12.6□□□□□ -0.39
PRKN-205ENST00000366897 PRRT4C9JH25 899 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 PSMD9O00233 223 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 CXCL10P02778 98 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 HMGN1P05114 100 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 CSNK2A2P19784 350 aaPredicted RBP12.59□□□□□ -0.39
PRKN-205ENST00000366897 HIST1H1TP22492 207 aaPredicted RBP12.59□□□□□ -0.39
PRKN-205ENST00000366897 GDNFP39905 211 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 PBX2P40425 430 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 OC90Q02509 493 aaPredicted RBP12.59□□□□□ -0.39
PRKN-205ENST00000366897 ZNF85Q03923 595 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 CRMP1Q14194 572 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 MAPK14Q16539 360 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 PUS10Q3MIT2 529 aaKnown RBP12.59□□□□□ -0.39
PRKN-205ENST00000366897 CLLU1Q5K131 121 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 SFRP5Q5T4F7 317 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 LINGO2Q7L985 606 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 LGALS14Q8TCE9 139 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 PGLYRP3Q96LB9 341 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 SLC25A18Q9H1K4 315 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 CAPN10Q9HC96 672 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 CA10Q9NS85 328 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 FBXO34Q9NWN3 711 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 KCNK6Q9Y257 313 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 TRPM6Q9BX84 2022 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 MDC1Q14676 2089 aaKnown RBP12.59□□□□□ -0.39
PRKN-205ENST00000366897 UNC119BA6NIH7 251 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 TRIM77I1YAP6 450 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 RRASP10301 218 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 SAGP10523 405 aaPredicted RBP12.59□□□□□ -0.39
PRKN-205ENST00000366897 LCN1P31025 176 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 NAA10P41227 235 aaPredicted RBP12.59□□□□□ -0.39
PRKN-205ENST00000366897 ST8SIA6P61647 398 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 PRR5P85299 388 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 TAGLNQ01995 201 aaKnown RBP12.59□□□□□ -0.39
PRKN-205ENST00000366897 SLC25A25Q6KCM7 469 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 ZNF836Q6ZNA1 936 aa12.59□□□□□ -0.39
PRKN-205ENST00000366897 FRRS1Q6ZNA5 592 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms