RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 EXOSC3Q9NQT5 275 aaKnown RBP12.7□□□□□ -0.38
PDLIM5-203ENST00000359265 RYDENQ9NUL5 291 aaKnown RBP12.7□□□□□ -0.38
PDLIM5-203ENST00000359265 FAM118AQ9NWS6 357 aa12.7□□□□□ -0.38
PDLIM5-203ENST00000359265 NTNG1Q9Y2I2 539 aa12.7□□□□□ -0.38
PDLIM5-203ENST00000359265 ALG1L2C9J202 215 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 GTPBP1O00178 669 aaKnown RBP12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 TERTO14746 1132 aaKnown RBP12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 ZNF264O43296 627 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 NADKO95544 446 aaPredicted RBP12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 HPP00738 406 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 FUT4P22083 530 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 CLK3P49761 638 aaKnown RBP12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 IL18R1Q13478 541 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 PGBD2Q6P3X8 592 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 ZNF730Q6ZMV8 503 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 USP51Q70EK9 711 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 RRM2BQ7LG56 351 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 DTX1Q86Y01 620 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 PARP8Q8N3A8 854 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 SLC15A4Q8N697 577 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 TMCO5AQ8N6Q1 288 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 GATSQ8NAP1 163 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 POGLUT1Q8NBL1 392 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 PIGXQ8TBF5 258 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 ACOT11Q8WXI4 607 aaPredicted RBP12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 GTPBP3Q969Y2 492 aaKnown RBP12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 IP6K3Q96PC2 410 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 DGCR6LQ9BY27 220 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 GPN2Q9H9Y4 310 aaPredicted RBP12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 ZNF160Q9HCG1 818 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 PNPLA3Q9NST1 481 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 SELENONQ9NZV5 590 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 MYOTQ9UBF9 498 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 RPS6KB2Q9UBS0 482 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 SLC7A7Q9UM01 511 aa12.69□□□□□ -0.38
PDLIM5-203ENST00000359265 CPAMD8Q8IZJ3 1885 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 LOC101059948A0A1B0GTJ6 334 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 LOC100130705A0A1B0GUX0 176 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 MAGEA13PA6NCF6 341 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 TMEM200CA6NKL6 621 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 BCKDKO14874 412 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 SLC16A6O15403 523 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 NDUFB5O43674 189 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 CHP2O43745 196 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 ICAM2P13598 275 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 EVI2BP34910 448 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 ACAA2P42765 397 aaKnown RBP12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 SLC6A8P48029 635 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 RPS6KA3P51812 740 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 CHN2P52757 468 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 SKP2Q13309 424 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 KEAP1Q14145 624 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 LY6DQ14210 128 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 CD226Q15762 336 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 NDUFAF6Q330K2 333 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 UGT2A3Q6UWM9 527 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 NUP54Q7Z3B4 507 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 MISPQ8IVT2 679 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 APLFQ8IW19 511 aaPredicted RBP12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 C8orf59Q8N0T1 100 aaPredicted RBP12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 LSMEM1Q8N8F7 131 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 SETD9Q8NE22 299 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 TTC9Q92623 222 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 TMCO6Q96DC7 493 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 NIPSNAP1Q9BPW8 284 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 UCK2Q9BZX2 261 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 ZBTB20Q9HC78 741 aaPredicted RBP12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 UBAP1Q9NZ09 502 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 FBXL4Q9UKA2 621 aa12.68□□□□□ -0.38
PDLIM5-203ENST00000359265 A0A087WUU8 490 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 A0A0B4J2E0 115 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 A0A1B0GWA3 101 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 A0A1B0GX12 115 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 SCO2O43819 266 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 EIF4E2O60573 245 aaKnown RBP12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 GASTP01350 101 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 GNAO1P09471 354 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 FBXO45P0C2W1 286 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 GSTM3P21266 225 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 CCR4P51679 360 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 COPZ1P61923 177 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 NPRL3Q12980 569 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 TBC1D25Q3MII6 688 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 C1orf94Q6P1W5 598 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 KLHL17Q6TDP4 642 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 APOOLQ6UXV4 268 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 LRRC69Q6ZNQ3 347 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 C16orf47Q6ZP98 133 aaPredicted RBP12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 MRGPREQ86SM8 312 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 NKAIN4Q8IVV8 208 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 CADM2Q8N3J6 435 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 AMER2Q8N7J2 671 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 RNF217Q8TC41 542 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 GNPDA2Q8TDQ7 276 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 HGDQ93099 445 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 MPP4Q96JB8 637 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 HS6ST2Q96MM7 605 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 PITX2Q99697 317 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 GRIP2Q9C0E4 1043 aa12.67□□□□□ -0.38
PDLIM5-203ENST00000359265 LAT2Q9GZY6 243 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms