RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 SDC3O75056 442 aa13.37□□□□□ -0.27
APP-205ENST00000358918 GATBO75879 557 aaKnown RBP13.37□□□□□ -0.27
APP-205ENST00000358918 DUX4L2P0CJ85 424 aa13.37□□□□□ -0.27
APP-205ENST00000358918 DUX4L3P0CJ86 424 aa13.37□□□□□ -0.27
APP-205ENST00000358918 DUX4L4P0CJ87 422 aa13.37□□□□□ -0.27
APP-205ENST00000358918 DUX4L5P0CJ88 424 aa13.37□□□□□ -0.27
APP-205ENST00000358918 DUX4L6P0CJ89 424 aa13.37□□□□□ -0.27
APP-205ENST00000358918 DUX4L7P0CJ90 424 aa13.37□□□□□ -0.27
APP-205ENST00000358918 AHRP35869 848 aa13.37□□□□□ -0.27
APP-205ENST00000358918 FRKP42685 505 aaPredicted RBP13.37□□□□□ -0.27
APP-205ENST00000358918 SIM1P81133 766 aaPredicted RBP13.37□□□□□ -0.27
APP-205ENST00000358918 PLPP4Q5VZY2 271 aa13.37□□□□□ -0.27
APP-205ENST00000358918 HSD11B1LQ7Z5J1 315 aa13.37□□□□□ -0.27
APP-205ENST00000358918 CMTM8Q8IZV2 173 aa13.37□□□□□ -0.27
APP-205ENST00000358918 TEX19Q8NA77 164 aa13.37□□□□□ -0.27
APP-205ENST00000358918 SMAD5Q99717 465 aaKnown RBP13.37□□□□□ -0.27
APP-205ENST00000358918 ARL6Q9H0F7 186 aa13.37□□□□□ -0.27
APP-205ENST00000358918 FN3KQ9H479 309 aa13.37□□□□□ -0.27
APP-205ENST00000358918 ZCCHC3Q9NUD5 404 aaKnown RBP13.37□□□□□ -0.27
APP-205ENST00000358918 DUX4Q9UBX2 424 aa13.37□□□□□ -0.27
APP-205ENST00000358918 ZC3H12DA2A288 527 aaKnown RBP13.37□□□□□ -0.27
APP-205ENST00000358918 MPTX1A8MV57 137 aa13.37□□□□□ -0.27
APP-205ENST00000358918 OR2A4O95047 310 aa13.37□□□□□ -0.27
APP-205ENST00000358918 CBX7O95931 251 aa13.37□□□□□ -0.27
APP-205ENST00000358918 FGBP02675 491 aa13.37□□□□□ -0.27
APP-205ENST00000358918 HIST1H2ABP04908 130 aa13.37□□□□□ -0.27
APP-205ENST00000358918 EPXP11678 715 aa13.37□□□□□ -0.27
APP-205ENST00000358918 NDUFV2P19404 249 aa13.37□□□□□ -0.27
APP-205ENST00000358918 CTSOP43234 321 aaPredicted RBP13.37□□□□□ -0.27
APP-205ENST00000358918 GCGRP47871 477 aa13.37□□□□□ -0.27
APP-205ENST00000358918 HOXA1P49639 335 aaPredicted RBP13.37□□□□□ -0.27
APP-205ENST00000358918 PRLHRP49683 370 aa13.37□□□□□ -0.27
APP-205ENST00000358918 ANXA11P50995 505 aaKnown RBP13.37□□□□□ -0.27
APP-205ENST00000358918 HENMT1Q5T8I9 393 aaKnown RBP13.37□□□□□ -0.27
APP-205ENST00000358918 NIPAL3Q6P499 406 aa13.37□□□□□ -0.27
APP-205ENST00000358918 C22orf39Q6P5X5 142 aa13.37□□□□□ -0.27
APP-205ENST00000358918 FBXO46Q6PJ61 603 aaPredicted RBP13.37□□□□□ -0.27
APP-205ENST00000358918 GSG1LQ6UXU4 331 aa13.37□□□□□ -0.27
APP-205ENST00000358918 MEPCEQ7L2J0 689 aaKnown RBP13.37□□□□□ -0.27
APP-205ENST00000358918 HIST3H2AQ7L7L0 130 aa13.37□□□□□ -0.27
APP-205ENST00000358918 MCATQ8IVS2 390 aaKnown RBP13.37□□□□□ -0.27
APP-205ENST00000358918 TRAM1L1Q8N609 369 aa13.37□□□□□ -0.27
APP-205ENST00000358918 ZNF671Q8TAW3 534 aa13.37□□□□□ -0.27
APP-205ENST00000358918 ZDHHC1Q8WTX9 485 aa13.37□□□□□ -0.27
APP-205ENST00000358918 DIO2Q92813 273 aa13.37□□□□□ -0.27
APP-205ENST00000358918 HIST1H2ACQ93077 130 aa13.37□□□□□ -0.27
APP-205ENST00000358918 OR2A7Q96R45 310 aa13.37□□□□□ -0.27
APP-205ENST00000358918 YIPF4Q9BSR8 244 aa13.37□□□□□ -0.27
APP-205ENST00000358918 RIOK2Q9BVS4 552 aaKnown RBP13.37□□□□□ -0.27
APP-205ENST00000358918 ANKRD19PQ9H560 264 aa13.37□□□□□ -0.27
APP-205ENST00000358918 EVA1AQ9H8M9 152 aa13.37□□□□□ -0.27
APP-205ENST00000358918 PLEKHA1Q9HB21 404 aa13.37□□□□□ -0.27
APP-205ENST00000358918 INPP5EQ9NRR6 644 aa13.37□□□□□ -0.27
APP-205ENST00000358918 ACSS1Q9NUB1 689 aaPredicted RBP13.37□□□□□ -0.27
APP-205ENST00000358918 PDE4DIPQ5VU43 2346 aa13.37□□□□□ -0.27
APP-205ENST00000358918 FLRT2O43155 660 aa13.36□□□□□ -0.27
APP-205ENST00000358918 FRS3O43559 492 aa13.36□□□□□ -0.27
APP-205ENST00000358918 ACVR1BP36896 505 aa13.36□□□□□ -0.27
APP-205ENST00000358918 AKR1D1P51857 326 aa13.36□□□□□ -0.27
APP-205ENST00000358918 DEFA5Q01523 94 aa13.36□□□□□ -0.27
APP-205ENST00000358918 SCRN3Q0VDG4 424 aa13.36□□□□□ -0.27
APP-205ENST00000358918 ZNF311Q5JNZ3 666 aa13.36□□□□□ -0.27
APP-205ENST00000358918 UBE2NLQ5JXB2 153 aa13.36□□□□□ -0.27
APP-205ENST00000358918 KHDRBS2Q5VWX1 349 aaKnown RBP13.36□□□□□ -0.27
APP-205ENST00000358918 Q6ZVL8 140 aa13.36□□□□□ -0.27
APP-205ENST00000358918 C17orf47Q8NEP4 570 aa13.36□□□□□ -0.27
APP-205ENST00000358918 OR9A1PQ8NGU1 263 aa13.36□□□□□ -0.27
APP-205ENST00000358918 ACOT11Q8WXI4 607 aaPredicted RBP13.36□□□□□ -0.27
APP-205ENST00000358918 TCEAL4Q96EI5 215 aa13.36□□□□□ -0.27
APP-205ENST00000358918 LRRC46Q96FV0 321 aa13.36□□□□□ -0.27
APP-205ENST00000358918 SAMD8Q96LT4 415 aa13.36□□□□□ -0.27
APP-205ENST00000358918 NOX3Q9HBY0 568 aa13.36□□□□□ -0.27
APP-205ENST00000358918 PRKAB1Q9Y478 270 aa13.36□□□□□ -0.27
APP-205ENST00000358918 TRAV1-2A0A0B4J238 106 aa13.36□□□□□ -0.27
APP-205ENST00000358918 A0A0G2JPF8 293 aa13.36□□□□□ -0.27
APP-205ENST00000358918 HNRNPCL3B7ZW38 293 aa13.36□□□□□ -0.27
APP-205ENST00000358918 KHDRBS3O75525 346 aaKnown RBP13.36□□□□□ -0.27
APP-205ENST00000358918 SC5DO75845 299 aa13.36□□□□□ -0.27
APP-205ENST00000358918 HNRNPCL4P0DMR1 293 aa13.36□□□□□ -0.27
APP-205ENST00000358918 TYRP1P17643 537 aa13.36□□□□□ -0.27
APP-205ENST00000358918 RPL35P42766 123 aaKnown RBP13.36□□□□□ -0.27
APP-205ENST00000358918 PRKAG1P54619 331 aa13.36□□□□□ -0.27
APP-205ENST00000358918 S100A12P80511 92 aa13.36□□□□□ -0.27
APP-205ENST00000358918 HTRA4P83105 476 aaPredicted RBP13.36□□□□□ -0.27
APP-205ENST00000358918 TMEM255AQ5JRV8 349 aa13.36□□□□□ -0.27
APP-205ENST00000358918 CDH26Q8IXH8 852 aa13.36□□□□□ -0.27
APP-205ENST00000358918 NRMQ8IXM6 262 aa13.36□□□□□ -0.27
APP-205ENST00000358918 FIBINQ8TAL6 211 aa13.36□□□□□ -0.27
APP-205ENST00000358918 ZFPM2Q8WW38 1151 aa13.36□□□□□ -0.27
APP-205ENST00000358918 KLK6Q92876 244 aa13.36□□□□□ -0.27
APP-205ENST00000358918 C4orf36Q96KX1 117 aa13.36□□□□□ -0.27
APP-205ENST00000358918 ORAI3Q9BRQ5 295 aa13.36□□□□□ -0.27
APP-205ENST00000358918 QRSL1Q9H0R6 528 aaKnown RBP13.36□□□□□ -0.27
APP-205ENST00000358918 MED20Q9H944 212 aa13.36□□□□□ -0.27
APP-205ENST00000358918 TAS2R5Q9NYW4 299 aa13.36□□□□□ -0.27
APP-205ENST00000358918 NTMQ9P121 344 aa13.36□□□□□ -0.27
APP-205ENST00000358918 FAM74A7A6NL05 159 aa13.35□□□□□ -0.27
APP-205ENST00000358918 OR5K4A6NMS3 321 aa13.35□□□□□ -0.27
APP-205ENST00000358918 HMSDA8MTL9 139 aa13.35□□□□□ -0.27
APP-205ENST00000358918 J3QLW9 94 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms