RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 WISP1O95388 367 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 LINGO3P0C6S8 592 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 SUMO3P55854 103 aaPredicted RBP13.5□□□□□ -0.25
CCNE1-202ENST00000357943 RGS8P57771 180 aaPredicted RBP13.5□□□□□ -0.25
CCNE1-202ENST00000357943 NPTX1Q15818 432 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 FKBP9P1Q75LS8 142 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 ZNF550Q7Z398 422 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 YRDCQ86U90 279 aaKnown RBP13.5□□□□□ -0.25
CCNE1-202ENST00000357943 LSRQ86X29 649 aaPredicted RBP13.5□□□□□ -0.25
CCNE1-202ENST00000357943 CARM1Q86X55 608 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 FAM109AQ8N4B1 249 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 LSM14AQ8ND56 463 aaKnown RBP13.5□□□□□ -0.25
CCNE1-202ENST00000357943 FAM83FQ8NEG4 500 aaPredicted RBP13.5□□□□□ -0.25
CCNE1-202ENST00000357943 SLC35B4Q969S0 331 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 SNRNP40Q96DI7 357 aaKnown RBP13.5□□□□□ -0.25
CCNE1-202ENST00000357943 ZDHHC11Q9H8X9 412 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 OLAHQ9NV23 265 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 MED17Q9NVC6 651 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 DKKL1Q9UK85 242 aa13.5□□□□□ -0.25
CCNE1-202ENST00000357943 RPH3AQ9Y2J0 694 aaPredicted RBP13.5□□□□□ -0.25
CCNE1-202ENST00000357943 PCNX3Q9H6A9 2034 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 TTLL8A6PVC2 850 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 SHISA8B8ZZ34 492 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 STAMBPO95630 424 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 HPNP05981 417 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 PGCP20142 388 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 MST1P26927 711 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 SRD5A2P31213 254 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 SLC6A8P48029 635 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 IDH2P48735 452 aaKnown RBP13.49□□□□□ -0.25
CCNE1-202ENST00000357943 ALDH6A1Q02252 535 aaKnown RBP13.49□□□□□ -0.25
CCNE1-202ENST00000357943 GANABQ14697 944 aaKnown RBP13.49□□□□□ -0.25
CCNE1-202ENST00000357943 QPRTQ15274 297 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 PLPPR5Q32ZL2 321 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 CMPK2Q5EBM0 449 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 C1orf146Q5VVC0 180 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 FAM180AQ6UWF9 173 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 SIAH3Q8IW03 269 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 ZNF440Q8IYI8 595 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 PYURFQ96I23 114 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 LRGUKQ96M69 825 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 DEFB127Q9H1M4 99 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 TAS2R10Q9NYW0 307 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 ANAPC2Q9UJX6 822 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 SLC9A8Q9Y2E8 581 aa13.49□□□□□ -0.25
CCNE1-202ENST00000357943 HEATR5AQ86XA9 2040 aa13.48□□□□□ -0.25
CCNE1-202ENST00000357943 NCKAP5O14513 1909 aa13.48□□□□□ -0.25
CCNE1-202ENST00000357943 NPIPA5E9PKD4 350 aa13.48□□□□□ -0.25
CCNE1-202ENST00000357943 SEMA7AO75326 666 aa13.48□□□□□ -0.25
CCNE1-202ENST00000357943 CRYABP02511 175 aaKnown RBP13.48□□□□□ -0.25
CCNE1-202ENST00000357943 HK1P19367 917 aa13.48□□□□□ -0.25
CCNE1-202ENST00000357943 HTR2AP28223 471 aa13.48□□□□□ -0.25
CCNE1-202ENST00000357943 ZNF41P51814 821 aaPredicted RBP13.48□□□□□ -0.25
CCNE1-202ENST00000357943 MLLT10P55197 1068 aa13.48□□□□□ -0.25
CCNE1-202ENST00000357943 SLC10A1Q14973 349 aa13.48□□□□□ -0.25
CCNE1-202ENST00000357943 IFI44LQ53G44 452 aa13.48□□□□□ -0.25
CCNE1-202ENST00000357943 MTX3Q5HYI7 312 aa13.48□□□□□ -0.25
CCNE1-202ENST00000357943 WIPI1Q5MNZ9 446 aaPredicted RBP13.48□□□□□ -0.25
CCNE1-202ENST00000357943 OR5M1Q8NGP8 315 aa13.48□□□□□ -0.25
CCNE1-202ENST00000357943 ZNF563Q8TA94 476 aa13.48□□□□□ -0.25
CCNE1-202ENST00000357943 GEMIN6Q8WXD5 167 aaKnown RBP13.48□□□□□ -0.25
CCNE1-202ENST00000357943 OR2B2Q9GZK3 357 aa13.48□□□□□ -0.25
CCNE1-202ENST00000357943 QPCTLQ9NXS2 382 aa13.48□□□□□ -0.25
CCNE1-202ENST00000357943 NPIPA1Q9UND3 350 aa13.48□□□□□ -0.25
CCNE1-202ENST00000357943 LIPGQ9Y5X9 500 aa13.48□□□□□ -0.25
CCNE1-202ENST00000357943 PRKCAP17252 672 aa13.47□□□□□ -0.25
CCNE1-202ENST00000357943 SESN3P58005 492 aa13.47□□□□□ -0.25
CCNE1-202ENST00000357943 FOXF1Q12946 379 aa13.47□□□□□ -0.25
CCNE1-202ENST00000357943 ZNF324BQ6AW86 544 aaPredicted RBP13.47□□□□□ -0.25
CCNE1-202ENST00000357943 TSPYL5Q86VY4 417 aaPredicted RBP13.47□□□□□ -0.25
CCNE1-202ENST00000357943 SPATA24Q86W54 205 aa13.47□□□□□ -0.25
CCNE1-202ENST00000357943 OR14L1PQ8NHC6 308 aa13.47□□□□□ -0.25
CCNE1-202ENST00000357943 FAR1Q8WVX9 515 aa13.47□□□□□ -0.25
CCNE1-202ENST00000357943 NR4A3Q92570 626 aa13.47□□□□□ -0.25
CCNE1-202ENST00000357943 SEPHS2Q99611 448 aa13.47□□□□□ -0.25
CCNE1-202ENST00000357943 TRIM15Q9C019 465 aa13.47□□□□□ -0.25
CCNE1-202ENST00000357943 AMBRA1Q9C0C7 1298 aa13.47□□□□□ -0.25
CCNE1-202ENST00000357943 SLC6A15Q9H2J7 730 aa13.47□□□□□ -0.25
CCNE1-202ENST00000357943 ACKR4Q9NPB9 350 aa13.47□□□□□ -0.25
CCNE1-202ENST00000357943 CTPS2Q9NRF8 586 aa13.47□□□□□ -0.25
CCNE1-202ENST00000357943 ASF1BQ9NVP2 202 aa13.47□□□□□ -0.25
CCNE1-202ENST00000357943 TESQ9UGI8 421 aaKnown RBP13.47□□□□□ -0.25
CCNE1-202ENST00000357943 A0A087WZY1 265 aa13.46□□□□□ -0.25
CCNE1-202ENST00000357943 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.46□□□□□ -0.25
CCNE1-202ENST00000357943 AQP12BA6NM10 295 aa13.46□□□□□ -0.25
CCNE1-202ENST00000357943 FAAHO00519 579 aa13.46□□□□□ -0.25
CCNE1-202ENST00000357943 CIB2O75838 187 aa13.46□□□□□ -0.25
CCNE1-202ENST00000357943 SEMG1P04279 462 aa13.46□□□□□ -0.25
CCNE1-202ENST00000357943 PRB1P04280 392 aa13.46□□□□□ -0.25
CCNE1-202ENST00000357943 VLDLRP98155 873 aa13.46□□□□□ -0.25
CCNE1-202ENST00000357943 KCNC4Q03721 635 aa13.46□□□□□ -0.25
CCNE1-202ENST00000357943 RAET1LQ5VY80 246 aa13.46□□□□□ -0.25
CCNE1-202ENST00000357943 DEF8Q6ZN54 512 aa13.46□□□□□ -0.25
CCNE1-202ENST00000357943 TSEN54Q7Z6J9 526 aaKnown RBP13.46□□□□□ -0.25
CCNE1-202ENST00000357943 RANBP3LQ86VV4 465 aaPredicted RBP13.46□□□□□ -0.25
CCNE1-202ENST00000357943 AQP12AQ8IXF9 295 aa13.46□□□□□ -0.25
CCNE1-202ENST00000357943 CADM2Q8N3J6 435 aa13.46□□□□□ -0.25
CCNE1-202ENST00000357943 LSMEM1Q8N8F7 131 aa13.46□□□□□ -0.25
CCNE1-202ENST00000357943 POC1BQ8TC44 478 aa13.46□□□□□ -0.25
CCNE1-202ENST00000357943 PHF10Q8WUB8 498 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms