RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 KDELR2P33947 212 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 RBM34P42696 430 aaKnown RBP8.43□□□□□ -1.06
UPF2-202ENST00000357604 DTX1Q86Y01 620 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 RBM15BQ8NDT2 890 aaKnown RBP8.43□□□□□ -1.06
UPF2-202ENST00000357604 CHDHQ8NE62 594 aaPredicted RBP8.43□□□□□ -1.06
UPF2-202ENST00000357604 OR10G3Q8NGC4 313 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 OR1J2Q8NGS2 313 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 CA5BP1Q8WTZ4 195 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 ZFP3Q96NJ6 502 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 ANGPTL4Q9BY76 406 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 BCL2L10Q9HD36 194 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 ACER3Q9NUN7 267 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 CES1P1Q9UKY3 287 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 ZNF337Q9Y3M9 751 aa8.43□□□□□ -1.06
UPF2-202ENST00000357604 NPIPA5A0A0B4J1W7 369 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 NPIPA7E9PJI5 369 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 TNFRSF21O75509 655 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 NPIPA8P0DM63 369 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 CAPN3P20807 821 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 OPRM1P35372 400 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 QPRTQ15274 297 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 ATP1A1-AS1Q5TC04 95 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 PAIP1Q9H074 479 aaKnown RBP8.42□□□□□ -1.06
UPF2-202ENST00000357604 GPR160Q9UJ42 338 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 OR14I1A6ND48 311 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 ALG1L2C9J202 215 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 BLVRAP53004 296 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 SELENOWP63302 87 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 OR1Q1Q15612 314 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 C9orf40Q8IXQ3 194 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 FDCSPQ8NFU4 85 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 STK35Q8TDR2 534 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 ZNF350Q9GZX5 532 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 C12orf10Q9HB07 376 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 NANSQ9NR45 359 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 ENAMQ9NRM1 1142 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 PRKD3O94806 890 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 PTPN6P29350 595 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 CPOXP36551 454 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 SLC1A3P43003 542 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 ESPNLQ6ZVH7 1005 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 WDR53Q7Z5U6 358 aaPredicted RBP8.42□□□□□ -1.06
UPF2-202ENST00000357604 RIMKLAQ8IXN7 391 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 SMAD5Q99717 465 aaKnown RBP8.42□□□□□ -1.06
UPF2-202ENST00000357604 TESMINQ9Y4I5 508 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 hCG_2039718K7EN88 272 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 HMGN4O00479 90 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 CNOT3O75175 753 aaKnown RBP8.42□□□□□ -1.06
UPF2-202ENST00000357604 FAM87AP0C7U9 286 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 NCK1P16333 377 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 TACR3P29371 465 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 PCBD1P61457 104 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 SWT1Q5T5J6 900 aaKnown RBP8.42□□□□□ -1.06
UPF2-202ENST00000357604 VRK2Q86Y07 508 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 LIX1LQ8IVB5 337 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 RFKQ969G6 155 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 KCNJ16Q9NPI9 418 aa8.42□□□□□ -1.06
UPF2-202ENST00000357604 TUBA8Q9NY65 449 aaPredicted RBP8.42□□□□□ -1.06
UPF2-202ENST00000357604 A0A087WV48 116 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 EEF1E1-BLOC1S5C9J1V9 151 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 EEF1E1O43324 174 aaKnown RBP8.41□□□□□ -1.06
UPF2-202ENST00000357604 CHRNEQ04844 493 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 PTGES3Q15185 160 aaKnown RBP8.41□□□□□ -1.06
UPF2-202ENST00000357604 ZNF141Q15928 474 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 OTUD3Q5T2D3 398 aaPredicted RBP8.41□□□□□ -1.06
UPF2-202ENST00000357604 PGM2L1Q6PCE3 622 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 OAFQ86UD1 273 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 LACC1Q8IV20 430 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 SLC16A11Q8NCK7 471 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 CHRNA9Q9UGM1 479 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 SLC7A7Q9UM01 511 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 SPAG17Q6Q759 2223 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.41□□□□□ -1.06
UPF2-202ENST00000357604 BNIP1Q12981 228 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 SYPL1Q16563 259 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 MOGQ16653 247 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 RABL3Q5HYI8 236 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 PAGE3Q5JUK9 113 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 ZBTB49Q6ZSB9 765 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 IMMP1LQ96LU5 166 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 ALPK1Q96QP1 1244 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 OSGIN2Q9Y236 505 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 PCDHGB1Q9Y5G3 927 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 BLOC1S5-TXNDC5H3BN57 136 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 RPSAP08865 295 aaKnown RBP8.41□□□□□ -1.06
UPF2-202ENST00000357604 CRYZQ08257 329 aaKnown RBP8.41□□□□□ -1.06
UPF2-202ENST00000357604 MELKQ14680 651 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 KIAA0040Q15053 153 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 OR2T5Q6IEZ7 315 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 LCN10Q6JVE6 187 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 OR2T29Q8NH02 315 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 PAQR8Q8TEZ7 354 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 SLC38A5Q8WUX1 472 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 APH1AQ96BI3 265 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 AURKBQ96GD4 344 aaPredicted RBP8.41□□□□□ -1.06
UPF2-202ENST00000357604 VSTM2LQ96N03 204 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 SEMA4CQ9C0C4 833 aa8.41□□□□□ -1.06
UPF2-202ENST00000357604 RPRD1BQ9NQG5 326 aaKnown RBP8.41□□□□□ -1.06
UPF2-202ENST00000357604 PAPOLBQ9NRJ5 636 aaKnown RBP8.41□□□□□ -1.06
UPF2-202ENST00000357604 AHRRA9YTQ3 701 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms