RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 MED17Q9NVC6 651 aa13.93□□□□□ -0.18
CHD4-201ENST00000357008 TSPAN11A1L157 253 aa13.93□□□□□ -0.18
CHD4-201ENST00000357008 AP1G1O43747 822 aa13.93□□□□□ -0.18
CHD4-201ENST00000357008 AOAHP28039 575 aa13.93□□□□□ -0.18
CHD4-201ENST00000357008 HNRNPKP61978 463 aaKnown RBP eCLIP13.93□□□□□ -0.188e-7■■■■■ 27.2
CHD4-201ENST00000357008 LTBQ06643 244 aa13.93□□□□□ -0.18
CHD4-201ENST00000357008 RAB31Q13636 194 aa13.93□□□□□ -0.18
CHD4-201ENST00000357008 ZNF169Q14929 603 aaPredicted RBP13.93□□□□□ -0.18
CHD4-201ENST00000357008 NIPAL3Q6P499 406 aa13.93□□□□□ -0.18
CHD4-201ENST00000357008 STEAP2Q8NFT2 490 aa13.93□□□□□ -0.18
CHD4-201ENST00000357008 ZNF419Q96HQ0 510 aaPredicted RBP13.93□□□□□ -0.18
CHD4-201ENST00000357008 SNX18Q96RF0 628 aa13.93□□□□□ -0.18
CHD4-201ENST00000357008 HINT2Q9BX68 163 aa13.93□□□□□ -0.18
CHD4-201ENST00000357008 ACSS1Q9NUB1 689 aaPredicted RBP13.93□□□□□ -0.18
CHD4-201ENST00000357008 ZNF337Q9Y3M9 751 aa13.93□□□□□ -0.18
CHD4-201ENST00000357008 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.92□□□□□ -0.18
CHD4-201ENST00000357008 CCDC85CA6NKD9 419 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 GJE1A6NN92 205 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 ZNF705FA8MVS1 300 aaPredicted RBP13.92□□□□□ -0.18
CHD4-201ENST00000357008 KRBOX1C9JBD0 128 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 ACOT8O14734 319 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 SCG5P05408 212 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 GYPBP06028 91 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 ZNF705DP0CH99 300 aaPredicted RBP13.92□□□□□ -0.18
CHD4-201ENST00000357008 ZNF705BP0CI00 300 aaPredicted RBP13.92□□□□□ -0.18
CHD4-201ENST00000357008 CAMK2DQ13557 499 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 SLC46A3Q7Z3Q1 461 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 HSD11B1LQ7Z5J1 315 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 KIAA1143Q96AT1 154 aaPredicted RBP13.92□□□□□ -0.18
CHD4-201ENST00000357008 PSD2Q9BQI7 771 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 NICN1Q9BSH3 213 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 TEX51A0A1B0GUA7 166 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 hCG_1807616A0A1W2PRN6 198 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 GPR39O43194 453 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 HLA-DMAP28067 261 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 BTN1A1Q13410 526 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 C3orf38Q5JPI3 329 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 TRMT2BQ96GJ1 504 aaKnown RBP13.92□□□□□ -0.18
CHD4-201ENST00000357008 SGCZQ96LD1 299 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 LRRC37A3O60309 1634 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 J3KTA2 159 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 LCATP04180 440 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 PPP3CBP16298 524 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 CX3CR1P49238 355 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 Q6ZPB1 254 aaPredicted RBP13.92□□□□□ -0.18
CHD4-201ENST00000357008 NPRL2Q8WTW4 380 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 OR7D2Q96RA2 312 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 INIPQ9NRY2 104 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 QPCTLQ9NXS2 382 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 GABRQQ9UN88 632 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 EFCAB7A8K855 629 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 HLA-AP01891 365 aaKnown RBP13.92□□□□□ -0.18
CHD4-201ENST00000357008 MMP2P08253 660 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 POLR2IP36954 125 aaKnown RBP13.92□□□□□ -0.18
CHD4-201ENST00000357008 ECH1Q13011 328 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 GGTA1PQ4G0N0 100 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 ZNF542PQ5EBM4 170 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 RTL6Q6ICC9 239 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 ZNF534Q76KX8 674 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 LAX1Q8IWV1 398 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 HORMAD2Q8N7B1 307 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 OR8J2Q8NGG1 315 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 FRZBQ92765 325 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 HRASLS5Q96KN8 279 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 RBM24Q9BX46 236 aaKnown RBP13.92□□□□□ -0.18
CHD4-201ENST00000357008 STRADBQ9C0K7 418 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 ZNF443Q9Y2A4 671 aaPredicted RBP13.92□□□□□ -0.18
CHD4-201ENST00000357008 SEC14L5O43304 696 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 MBTPS1Q14703 1052 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 SYPL1Q16563 259 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 LACC1Q8IV20 430 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 SULF2Q8IWU5 870 aa13.92□□□□□ -0.18
CHD4-201ENST00000357008 TRAV27A0A087WT01 109 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 TGM5O43548 720 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 GABARAPO95166 117 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 GASTP01350 101 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 CSNK1DP48730 415 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 RRAS2P62070 204 aaPredicted RBP13.91□□□□□ -0.18
CHD4-201ENST00000357008 KIR2DS3Q14952 304 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 HBMQ6B0K9 141 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 LYPD4Q6UWN0 246 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 OR4M1Q8NGD0 313 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 TBC1D20Q96BZ9 403 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 KCMF1Q9P0J7 381 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 RARRES3Q9UL19 164 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 ZNF281Q9Y2X9 895 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 NPIPA5A0A0B4J1W7 369 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 ANKRD33BA6NCL7 494 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 NPIPA7E9PJI5 369 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 P04436 131 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 NPIPA8P0DM63 369 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 IL32P24001 234 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 CLVS2Q5SYC1 327 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 FCRLAQ7L513 359 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 DNAAF1Q8NEP3 725 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 ZNF480Q8WV37 535 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 COPS3Q9UNS2 423 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 TTLL8A6PVC2 850 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 SCGB2A1O75556 95 aa13.91□□□□□ -0.18
CHD4-201ENST00000357008 ZNF865P0CJ78 1059 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms