RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 RPH3AQ9Y2J0 694 aaPredicted RBP14.1□□□□□ -0.15
TRIM13-201ENST00000356017 OR14I1A6ND48 311 aa14.09□□□□□ -0.15
TRIM13-201ENST00000356017 AQP7O14520 342 aa14.09□□□□□ -0.15
TRIM13-201ENST00000356017 STAMBPO95630 424 aa14.09□□□□□ -0.15
TRIM13-201ENST00000356017 NCK1P16333 377 aa14.09□□□□□ -0.15
TRIM13-201ENST00000356017 ZNF17P17021 662 aa14.09□□□□□ -0.15
TRIM13-201ENST00000356017 CD247P20963 164 aa14.09□□□□□ -0.15
TRIM13-201ENST00000356017 CHMP24386 653 aa14.09□□□□□ -0.15
TRIM13-201ENST00000356017 MSX2P35548 267 aaPredicted RBP14.09□□□□□ -0.15
TRIM13-201ENST00000356017 RBPJQ06330 500 aa14.09□□□□□ -0.15
TRIM13-201ENST00000356017 QPRTQ15274 297 aa14.09□□□□□ -0.15
TRIM13-201ENST00000356017 GLIPR1L2Q4G1C9 344 aa14.09□□□□□ -0.15
TRIM13-201ENST00000356017 RAET1LQ5VY80 246 aa14.09□□□□□ -0.15
TRIM13-201ENST00000356017 GTPBP8Q8N3Z3 284 aaPredicted RBP14.09□□□□□ -0.15
TRIM13-201ENST00000356017 ST6GALNAC3Q8NDV1 305 aa14.09□□□□□ -0.15
TRIM13-201ENST00000356017 GPR32P1Q8NGA4 272 aa14.09□□□□□ -0.15
TRIM13-201ENST00000356017 OR52E4Q8NGH9 312 aa14.09□□□□□ -0.15
TRIM13-201ENST00000356017 ASB9Q96DX5 294 aa14.09□□□□□ -0.15
TRIM13-201ENST00000356017 MRGPRX4Q96LA9 322 aa14.09□□□□□ -0.15
TRIM13-201ENST00000356017 RSPO3Q9BXY4 272 aaPredicted RBP14.09□□□□□ -0.15
TRIM13-201ENST00000356017 PCDHAC1Q9H158 963 aa14.09□□□□□ -0.15
TRIM13-201ENST00000356017 ACTR3BQ9P1U1 418 aa14.09□□□□□ -0.15
TRIM13-201ENST00000356017 RALYQ9UKM9 306 aaKnown RBP14.09□□□□□ -0.15
TRIM13-201ENST00000356017 SAMD4AQ9UPU9 718 aaKnown RBP14.09□□□□□ -0.15
TRIM13-201ENST00000356017 COL6A6A6NMZ7 2263 aa14.08□□□□□ -0.15
TRIM13-201ENST00000356017 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.08□□□□□ -0.15
TRIM13-201ENST00000356017 ETV2O00321 342 aaPredicted RBP14.08□□□□□ -0.15
TRIM13-201ENST00000356017 ARPC2O15144 300 aa14.08□□□□□ -0.15
TRIM13-201ENST00000356017 PDE5AO76074 875 aa14.08□□□□□ -0.15
TRIM13-201ENST00000356017 EPPINO95925 133 aa14.08□□□□□ -0.15
TRIM13-201ENST00000356017 ACTL6AO96019 429 aa14.08□□□□□ -0.15
TRIM13-201ENST00000356017 SERPINA1P01009 418 aa14.08□□□□□ -0.15
TRIM13-201ENST00000356017 GKN3PP0CG01 181 aa14.08□□□□□ -0.15
TRIM13-201ENST00000356017 PRKCAP17252 672 aa14.08□□□□□ -0.15
TRIM13-201ENST00000356017 ACAA2P42765 397 aaKnown RBP14.08□□□□□ -0.15
TRIM13-201ENST00000356017 HTR3AP46098 478 aa14.08□□□□□ -0.15
TRIM13-201ENST00000356017 IDH2P48735 452 aaKnown RBP14.08□□□□□ -0.15
TRIM13-201ENST00000356017 RGS8P57771 180 aaPredicted RBP14.08□□□□□ -0.15
TRIM13-201ENST00000356017 NCALDP61601 193 aa14.08□□□□□ -0.15
TRIM13-201ENST00000356017 SLC25A53Q5H9E4 307 aa14.08□□□□□ -0.15
TRIM13-201ENST00000356017 NHSL2Q5HYW2 709 aa14.08□□□□□ -0.15
TRIM13-201ENST00000356017 GFRALQ6UXV0 394 aa14.08□□□□□ -0.15
TRIM13-201ENST00000356017 CBLL1Q75N03 491 aa14.08□□□□□ -0.15
TRIM13-201ENST00000356017 YTHDF3Q7Z739 585 aaKnown RBP14.08□□□□□ -0.15
TRIM13-201ENST00000356017 RANBP3LQ86VV4 465 aaPredicted RBP14.08□□□□□ -0.15
TRIM13-201ENST00000356017 POP5Q969H6 163 aaKnown RBP14.08□□□□□ -0.15
TRIM13-201ENST00000356017 SARAFQ96BY9 339 aa14.08□□□□□ -0.15
TRIM13-201ENST00000356017 TPD52L3Q96J77 140 aa14.08□□□□□ -0.15
TRIM13-201ENST00000356017 NSMCE2Q96MF7 247 aa14.08□□□□□ -0.15
TRIM13-201ENST00000356017 SFXN2Q96NB2 322 aa14.08□□□□□ -0.15
TRIM13-201ENST00000356017 CADM1Q9BY67 442 aaKnown RBP14.08□□□□□ -0.15
TRIM13-201ENST00000356017 SLC6A15Q9H2J7 730 aa14.08□□□□□ -0.15
TRIM13-201ENST00000356017 DCAF13Q9NV06 445 aaKnown RBP14.08□□□□□ -0.15
TRIM13-201ENST00000356017 TESQ9UGI8 421 aaKnown RBP14.08□□□□□ -0.15
TRIM13-201ENST00000356017 SH3GLB1Q9Y371 365 aa14.08□□□□□ -0.15
TRIM13-201ENST00000356017 ZFYVE26Q68DK2 2539 aa14.08□□□□□ -0.16
TRIM13-201ENST00000356017 A0A1B0GTH9 108 aa14.08□□□□□ -0.16
TRIM13-201ENST00000356017 ERICH4A6NGS2 130 aa14.08□□□□□ -0.16
TRIM13-201ENST00000356017 ADAM11O75078 769 aa14.08□□□□□ -0.16
TRIM13-201ENST00000356017 ZNF682O95780 498 aa14.08□□□□□ -0.16
TRIM13-201ENST00000356017 GP1BBP13224 206 aa14.08□□□□□ -0.16
TRIM13-201ENST00000356017 SLC1A3P43003 542 aa14.08□□□□□ -0.16
TRIM13-201ENST00000356017 GFRA1P56159 465 aa14.08□□□□□ -0.16
TRIM13-201ENST00000356017 SESN3P58005 492 aa14.08□□□□□ -0.16
TRIM13-201ENST00000356017 TRAP1Q12931 704 aaKnown RBP14.08□□□□□ -0.16
TRIM13-201ENST00000356017 TOMM34Q15785 309 aaPredicted RBP14.08□□□□□ -0.16
TRIM13-201ENST00000356017 NRF1Q16656 503 aa14.08□□□□□ -0.16
TRIM13-201ENST00000356017 TMEM44Q2T9K0 475 aa14.08□□□□□ -0.16
TRIM13-201ENST00000356017 WBP2NLQ6ICG8 309 aa14.08□□□□□ -0.16
TRIM13-201ENST00000356017 PGM2L1Q6PCE3 622 aa14.08□□□□□ -0.16
TRIM13-201ENST00000356017 ENPP6Q6UWR7 440 aa14.08□□□□□ -0.16
TRIM13-201ENST00000356017 GRINAQ7Z429 371 aa14.08□□□□□ -0.16
TRIM13-201ENST00000356017 DHFR2Q86XF0 187 aa14.08□□□□□ -0.16
TRIM13-201ENST00000356017 CLPTM1LQ96KA5 538 aa14.08□□□□□ -0.16
TRIM13-201ENST00000356017 ARHGDIGQ99819 225 aa14.08□□□□□ -0.16
TRIM13-201ENST00000356017 ACER3Q9NUN7 267 aa14.08□□□□□ -0.16
TRIM13-201ENST00000356017 LIPGQ9Y5X9 500 aa14.08□□□□□ -0.16
TRIM13-201ENST00000356017 FAM208BQ5VWN6 2430 aa14.07□□□□□ -0.16
TRIM13-201ENST00000356017 AP3D1O14617 1153 aa14.07□□□□□ -0.16
TRIM13-201ENST00000356017 BCKDKO14874 412 aa14.07□□□□□ -0.16
TRIM13-201ENST00000356017 FRS3O43559 492 aa14.07□□□□□ -0.16
TRIM13-201ENST00000356017 FMO6PO60774 539 aa14.07□□□□□ -0.16
TRIM13-201ENST00000356017 WISP2O76076 250 aa14.07□□□□□ -0.16
TRIM13-201ENST00000356017 PRG2P13727 222 aa14.07□□□□□ -0.16
TRIM13-201ENST00000356017 ELK4P28324 431 aa14.07□□□□□ -0.16
TRIM13-201ENST00000356017 PTGS2P35354 604 aa14.07□□□□□ -0.16
TRIM13-201ENST00000356017 APOBEC1P41238 236 aaKnown RBP14.07□□□□□ -0.16
TRIM13-201ENST00000356017 DLX5P56178 289 aa14.07□□□□□ -0.16
TRIM13-201ENST00000356017 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.07□□□□□ -0.162e-6■■□□□ 11.5
TRIM13-201ENST00000356017 MTX3Q5HYI7 312 aa14.07□□□□□ -0.16
TRIM13-201ENST00000356017 VASNQ6EMK4 673 aa14.07□□□□□ -0.16
TRIM13-201ENST00000356017 FKBP9P1Q75LS8 142 aa14.07□□□□□ -0.16
TRIM13-201ENST00000356017 COMTD1Q86VU5 262 aa14.07□□□□□ -0.16
TRIM13-201ENST00000356017 ATCAYQ86WG3 371 aa14.07□□□□□ -0.16
TRIM13-201ENST00000356017 SPPL2CQ8IUH8 684 aa14.07□□□□□ -0.16
TRIM13-201ENST00000356017 ULK2Q8IYT8 1036 aa14.07□□□□□ -0.16
TRIM13-201ENST00000356017 LSMEM1Q8N8F7 131 aa14.07□□□□□ -0.16
TRIM13-201ENST00000356017 GALNT11Q8NCW6 608 aa14.07□□□□□ -0.16
TRIM13-201ENST00000356017 ABTB1Q969K4 478 aaPredicted RBP14.07□□□□□ -0.16
TRIM13-201ENST00000356017 MIB2Q96AX9 1013 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms