RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 CNRIP1Q96F85 164 aaPredicted RBP7.97□□□□□ -1.13
TRIM55-204ENST00000353317 AMDHD1Q96NU7 426 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 CITED4Q96RK1 184 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 ZFYVE21Q9BQ24 234 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 ZNF649Q9BS31 505 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 ACSS1Q9NUB1 689 aaPredicted RBP7.97□□□□□ -1.13
TRIM55-204ENST00000353317 CES1P1Q9UKY3 287 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 CLCA2Q9UQC9 943 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 ENTPD2Q9Y5L3 495 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 U3KQA8 63 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 ADAMTS20P59510 1910 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 KIF26BQ2KJY2 2108 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 FAM221BA6H8Z2 402 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 SNTNA6NMZ2 147 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 KDM4EB2RXH2 506 aaPredicted RBP7.97□□□□□ -1.13
TRIM55-204ENST00000353317 GABRPO00591 440 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 PLOD3O60568 738 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 TRIM3O75382 744 aaPredicted RBP7.97□□□□□ -1.13
TRIM55-204ENST00000353317 AIFM1O95831 613 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 PROS1P07225 676 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 ARSBP15848 533 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 EVI2BP34910 448 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 GABRA4P48169 554 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 CDH11P55287 796 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 P2RX3P56373 397 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 RAB25P57735 213 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 VSX2P58304 361 aaPredicted RBP7.97□□□□□ -1.13
TRIM55-204ENST00000353317 RRAS2P62070 204 aaPredicted RBP7.97□□□□□ -1.13
TRIM55-204ENST00000353317 KCNAB1Q14722 419 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 HLA-BQ31612 363 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 TMEM35AQ53FP2 167 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 C6orf132Q5T0Z8 1188 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 SLC30A6Q6NXT4 461 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 METAP1DQ6UB28 335 aaPredicted RBP7.97□□□□□ -1.13
TRIM55-204ENST00000353317 B3GLCTQ6Y288 498 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 USP53Q70EK8 1073 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 TRILQ7L0X0 811 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 DTWD2Q8NBA8 298 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 POGLUT1Q8NBL1 392 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 ZG16BQ96DA0 208 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 FAM46AQ96IP4 442 aaKnown RBP7.97□□□□□ -1.13
TRIM55-204ENST00000353317 TGM7Q96PF1 710 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 SLC38A3Q99624 504 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 RNF32Q9H0A6 362 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 NIPAL2Q9H841 368 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 TRIM45Q9H8W5 580 aaPredicted RBP7.97□□□□□ -1.13
TRIM55-204ENST00000353317 ADAM29Q9UKF5 820 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 LIPT1Q9Y234 373 aa7.97□□□□□ -1.13
TRIM55-204ENST00000353317 ZNF318Q5VUA4 2279 aa7.96□□□□□ -1.13
TRIM55-204ENST00000353317 IRGMA1A4Y4 181 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 CD8B2A6NJW9 211 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 HLA-DPB1P04440 258 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 CD8BP10966 210 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 CSF2RBP32927 897 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 AGFG1P52594 562 aaKnown RBP7.96□□□□□ -1.14
TRIM55-204ENST00000353317 C19orf57Q0VDD7 668 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 RIN1Q13671 783 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 LASP1Q14847 261 aaKnown RBP7.96□□□□□ -1.14
TRIM55-204ENST00000353317 MLC1Q15049 377 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 BTBD16Q32M84 506 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 ZNF791Q3KP31 576 aaPredicted RBP7.96□□□□□ -1.14
TRIM55-204ENST00000353317 NR2C2APQ86WQ0 139 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 MARCH9Q86YJ5 346 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 SUN3Q8TAQ9 357 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 DOK4Q8TEW6 326 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 SLC38A2Q96QD8 506 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 WACQ9BTA9 647 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 SEMA6CQ9H3T2 930 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 ERVMER34-1Q9H9K5 563 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 GALNT9Q9HCQ5 603 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 BCL2L10Q9HD36 194 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 ING3Q9NXR8 418 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 IL20RAQ9UHF4 553 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 GPR55Q9Y2T6 319 aaPredicted RBP7.96□□□□□ -1.14
TRIM55-204ENST00000353317 KCNE3Q9Y6H6 103 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 CDH10Q9Y6N8 788 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 FREM2Q5SZK8 3169 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 CELSR3Q9NYQ7 3312 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 IGHV1OR21-1A0A087WYE8 117 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 OR2W5A6NFC9 320 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 LILRA5A6NI73 299 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 CPSF4LA6NMK7 179 aaKnown RBP7.96□□□□□ -1.14
TRIM55-204ENST00000353317 SGK494L7N484 410 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 SLC43A1O75387 559 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 OR2B3O76000 313 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 HMGN2P05204 90 aaKnown RBP7.96□□□□□ -1.14
TRIM55-204ENST00000353317 NCBP2P52298 156 aaKnown RBP eCLIP7.96□□□□□ -1.14
TRIM55-204ENST00000353317 TAS2R41P59536 307 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 TSPAN31Q12999 210 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 SLC9A5Q14940 896 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 SF3A2Q15428 464 aaKnown RBP7.96□□□□□ -1.14
TRIM55-204ENST00000353317 AMZ1Q400G9 498 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 CEP78Q5JTW2 689 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 PRAMEF17Q5VTA0 474 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 AADACL4Q5VUY2 407 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 TMEM91Q6ZNR0 172 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 RFPL4BQ6ZWI9 263 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 OR4N5Q8IXE1 308 aa7.96□□□□□ -1.14
TRIM55-204ENST00000353317 C19orf47Q8N9M1 422 aaKnown RBP7.96□□□□□ -1.14
TRIM55-204ENST00000353317 BBS1Q8NFJ9 593 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms