RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 TREX2Q9BQ50 279 aaPredicted RBP19.89■□□□□ 0.77
SNX3-202ENST00000349379 IKZF5Q9H5V7 419 aa19.89■□□□□ 0.77
SNX3-202ENST00000349379 A4GALTQ9NPC4 353 aa19.89■□□□□ 0.77
SNX3-202ENST00000349379 KCNJ16Q9NPI9 418 aa19.89■□□□□ 0.77
SNX3-202ENST00000349379 SAR1AQ9NR31 198 aa19.89■□□□□ 0.77
SNX3-202ENST00000349379 NUDT14O95848 222 aa19.88■□□□□ 0.77
SNX3-202ENST00000349379 TGM6O95932 706 aa19.88■□□□□ 0.77
SNX3-202ENST00000349379 IL18BPO95998 194 aa19.88■□□□□ 0.77
SNX3-202ENST00000349379 GPX2P18283 190 aa19.88■□□□□ 0.77
SNX3-202ENST00000349379 IL11P20809 199 aa19.88■□□□□ 0.77
SNX3-202ENST00000349379 QPRTQ15274 297 aa19.88■□□□□ 0.77
SNX3-202ENST00000349379 PRAMEF8Q5VWM4 474 aa19.88■□□□□ 0.77
SNX3-202ENST00000349379 PRAMEF7Q5VXH5 474 aa19.88■□□□□ 0.77
SNX3-202ENST00000349379 FBXO27Q8NI29 283 aa19.88■□□□□ 0.77
SNX3-202ENST00000349379 WDR60Q8WVS4 1066 aa19.88■□□□□ 0.77
SNX3-202ENST00000349379 ST8SIA1Q92185 356 aa19.88■□□□□ 0.77
SNX3-202ENST00000349379 SMPDL3BQ92485 455 aa19.88■□□□□ 0.77
SNX3-202ENST00000349379 TMEM19Q96HH6 336 aa19.88■□□□□ 0.77
SNX3-202ENST00000349379 CPPED1Q9BRF8 314 aaPredicted RBP19.88■□□□□ 0.77
SNX3-202ENST00000349379 THUMPD3Q9BV44 507 aaKnown RBP19.88■□□□□ 0.77
SNX3-202ENST00000349379 ENKD1Q9H0I2 346 aa19.88■□□□□ 0.77
SNX3-202ENST00000349379 BCL2L10Q9HD36 194 aa19.88■□□□□ 0.77
SNX3-202ENST00000349379 NPDC1Q9NQX5 325 aaPredicted RBP19.88■□□□□ 0.77
SNX3-202ENST00000349379 STOML1Q9UBI4 398 aa19.88■□□□□ 0.77
SNX3-202ENST00000349379 UNC79Q9P2D8 2635 aa19.88■□□□□ 0.77
SNX3-202ENST00000349379 MPDZO75970 2070 aa19.87■□□□□ 0.77
SNX3-202ENST00000349379 ANGPT2O15123 496 aa19.87■□□□□ 0.77
SNX3-202ENST00000349379 ADAMDEC1O15204 470 aa19.87■□□□□ 0.77
SNX3-202ENST00000349379 ADAM11O75078 769 aa19.87■□□□□ 0.77
SNX3-202ENST00000349379 DBIP07108 87 aaKnown RBP19.87■□□□□ 0.77
SNX3-202ENST00000349379 SNRPB2P08579 225 aaKnown RBP19.87■□□□□ 0.77
SNX3-202ENST00000349379 NID1P14543 1247 aa19.87■□□□□ 0.77
SNX3-202ENST00000349379 IGFBP2P18065 325 aa19.87■□□□□ 0.77
SNX3-202ENST00000349379 CTSSP25774 331 aa19.87■□□□□ 0.77
SNX3-202ENST00000349379 CCR4P51679 360 aa19.87■□□□□ 0.77
SNX3-202ENST00000349379 RPS3AP61247 264 aaKnown RBP19.87■□□□□ 0.77
SNX3-202ENST00000349379 SF3A3Q12874 501 aaKnown RBP eCLIP19.87■□□□□ 0.77
SNX3-202ENST00000349379 RUNDC3AQ59EK9 446 aa19.87■□□□□ 0.77
SNX3-202ENST00000349379 DHDDSQ86SQ9 333 aa19.87■□□□□ 0.77
SNX3-202ENST00000349379 GRAMD2AQ8IUY3 354 aa19.87■□□□□ 0.77
SNX3-202ENST00000349379 CNOT9Q92600 299 aaKnown RBP19.87■□□□□ 0.77
SNX3-202ENST00000349379 ZNF845Q96IR2 970 aaPredicted RBP19.87■□□□□ 0.77
SNX3-202ENST00000349379 DNAJB12Q9NXW2 375 aaKnown RBP19.87■□□□□ 0.77
SNX3-202ENST00000349379 ZNF175Q9Y473 711 aa19.87■□□□□ 0.77
SNX3-202ENST00000349379 A0A0G2JPF8 293 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 A0A0J9YW62 118 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 HNRNPCL2B2RXH8 293 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 HNRNPCL3B7ZW38 293 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 DVL2O14641 736 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 HNRNPCL1O60812 293 aaKnown RBP19.86■□□□□ 0.77
SNX3-202ENST00000349379 CYP7B1O75881 506 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 HNRNPCL4P0DMR1 293 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 TMIGD3P0DMS9 266 aaPredicted RBP19.86■□□□□ 0.77
SNX3-202ENST00000349379 ARAFP10398 606 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 PGCP20142 388 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 SHC1P29353 583 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 ADSLP30566 484 aaPredicted RBP19.86■□□□□ 0.77
SNX3-202ENST00000349379 FOXF2Q12947 444 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 KLF10Q13118 480 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 GNA13Q14344 377 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 RPS26P11Q5JNZ5 115 aaPredicted RBP19.86■□□□□ 0.77
SNX3-202ENST00000349379 MRPL2Q5T653 305 aaKnown RBP19.86■□□□□ 0.77
SNX3-202ENST00000349379 ESPNLQ6ZVH7 1005 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 CHMP1BQ7LBR1 199 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 PEX5LQ8IYB4 626 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 FIG4Q92562 907 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 MAL2Q969L2 176 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 PINK1Q9BXM7 581 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 ACER3Q9NUN7 267 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 CORO2BQ9UQ03 480 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 ADGRG4Q8IZF6 3080 aa19.86■□□□□ 0.77
SNX3-202ENST00000349379 CRYBG3Q68DQ2 2970 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 TMEM247A6NEH6 219 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 SLC22A20A6NK97 555 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 FBP2O00757 339 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 DYNC1I1O14576 645 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 EIF1AYO14602 144 aaKnown RBP19.85■□□□□ 0.77
SNX3-202ENST00000349379 HNRNPRO43390 633 aaKnown RBP19.85■□□□□ 0.77
SNX3-202ENST00000349379 THBS1P07996 1170 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 IL7RP16871 459 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 SESN3P58005 492 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 SELENBP1Q13228 472 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 FBXL19-AS1Q494R0 122 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 OR52P1PQ8NH57 321 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 OR10D3Q8NH80 312 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 OR2V1Q8NHB1 315 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 TMEM234Q8WY98 164 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 KLHL15Q96M94 604 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 ANKRD27Q96NW4 1050 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 CGREF1Q99674 301 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 SPOCK3Q9BQ16 436 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 SFXN3Q9BWM7 321 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 TMEM38AQ9H6F2 299 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 TMEM185BQ9H7F4 350 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 PAQR5Q9NXK6 330 aaPredicted RBP19.85■□□□□ 0.77
SNX3-202ENST00000349379 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.85■□□□□ 0.77
SNX3-202ENST00000349379 CHST2Q9Y4C5 530 aa19.85■□□□□ 0.77
SNX3-202ENST00000349379 CDHR4A6H8M9 788 aa19.84■□□□□ 0.77
SNX3-202ENST00000349379 FAAHO00519 579 aa19.84■□□□□ 0.77
SNX3-202ENST00000349379 BMP5P22003 454 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms