RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 PLCZ1Q86YW0 608 aa24.64■■□□□ 1.54
SSBP4-202ENST00000348495 OR2M3Q8NG83 312 aa24.64■■□□□ 1.54
SSBP4-202ENST00000348495 HES7Q9BYE0 225 aa24.64■■□□□ 1.54
SSBP4-202ENST00000348495 LYVE1Q9Y5Y7 322 aa24.64■■□□□ 1.54
SSBP4-202ENST00000348495 PCNX3Q9H6A9 2034 aa24.64■■□□□ 1.53
SSBP4-202ENST00000348495 NME2P1O60361 137 aa24.64■■□□□ 1.53
SSBP4-202ENST00000348495 LYPD3O95274 346 aa24.64■■□□□ 1.53
SSBP4-202ENST00000348495 SP1P08047 785 aa24.64■■□□□ 1.53
SSBP4-202ENST00000348495 UQCRBP14927 111 aa24.64■■□□□ 1.53
SSBP4-202ENST00000348495 NME2P22392 152 aa24.64■■□□□ 1.53
SSBP4-202ENST00000348495 LIMS1P48059 325 aa24.64■■□□□ 1.53
SSBP4-202ENST00000348495 CXADRP78310 365 aa24.64■■□□□ 1.53
SSBP4-202ENST00000348495 SPIBQ01892 262 aa24.64■■□□□ 1.53
SSBP4-202ENST00000348495 TIGD3Q6B0B8 471 aa24.64■■□□□ 1.53
SSBP4-202ENST00000348495 SLC25A25Q6KCM7 469 aa24.64■■□□□ 1.53
SSBP4-202ENST00000348495 CATSPER1Q8NEC5 780 aa24.64■■□□□ 1.53
SSBP4-202ENST00000348495 SCMH1Q96GD3 660 aa24.64■■□□□ 1.53
SSBP4-202ENST00000348495 FNDC11Q9BVV2 318 aa24.64■■□□□ 1.53
SSBP4-202ENST00000348495 REEP1Q9H902 201 aa24.64■■□□□ 1.53
SSBP4-202ENST00000348495 TMEM27Q9HBJ8 222 aa24.64■■□□□ 1.53
SSBP4-202ENST00000348495 A0A0B4J2E0 115 aa24.63■■□□□ 1.53
SSBP4-202ENST00000348495 A0A1B0GWA3 101 aa24.63■■□□□ 1.53
SSBP4-202ENST00000348495 A0A1B0GX12 115 aa24.63■■□□□ 1.53
SSBP4-202ENST00000348495 A0A1W2PRQ8 180 aa24.63■■□□□ 1.53
SSBP4-202ENST00000348495 TRAPPC13A5PLN9 417 aa24.63■■□□□ 1.53
SSBP4-202ENST00000348495 GNGT2O14610 69 aa24.63■■□□□ 1.53
SSBP4-202ENST00000348495 GMFGO60234 142 aa24.63■■□□□ 1.53
SSBP4-202ENST00000348495 ITGB2P05107 769 aa24.63■■□□□ 1.53
SSBP4-202ENST00000348495 H1F0P07305 194 aaKnown RBP24.63■■□□□ 1.53
SSBP4-202ENST00000348495 PGCP20142 388 aa24.63■■□□□ 1.53
SSBP4-202ENST00000348495 IDH2P48735 452 aaKnown RBP24.63■■□□□ 1.53
SSBP4-202ENST00000348495 IST1P53990 364 aa24.63■■□□□ 1.53
SSBP4-202ENST00000348495 CDH12P55289 794 aa24.63■■□□□ 1.53
SSBP4-202ENST00000348495 DGCR6Q14129 220 aa24.63■■□□□ 1.53
SSBP4-202ENST00000348495 TOMM34Q15785 309 aaPredicted RBP24.63■■□□□ 1.53
SSBP4-202ENST00000348495 COLEC12Q5KU26 742 aa24.63■■□□□ 1.53
SSBP4-202ENST00000348495 GDF7Q7Z4P5 450 aa24.63■■□□□ 1.53
SSBP4-202ENST00000348495 OR4C15Q8NGM1 316 aa24.63■■□□□ 1.53
SSBP4-202ENST00000348495 SLC41A3Q96GZ6 507 aa24.63■■□□□ 1.53
SSBP4-202ENST00000348495 DSN1Q9H410 356 aa24.63■■□□□ 1.53
SSBP4-202ENST00000348495 FBXL2Q9UKC9 423 aa24.63■■□□□ 1.53
SSBP4-202ENST00000348495 CSAG2Q9Y5P2 127 aa24.63■■□□□ 1.53
SSBP4-202ENST00000348495 MGAQ8IWI9 3026 aa24.62■■□□□ 1.53
SSBP4-202ENST00000348495 THRBP10828 461 aa24.62■■□□□ 1.53
SSBP4-202ENST00000348495 CD46P15529 392 aa24.62■■□□□ 1.53
SSBP4-202ENST00000348495 GPR85P60893 370 aa24.62■■□□□ 1.53
SSBP4-202ENST00000348495 COPZ1P61923 177 aa24.62■■□□□ 1.53
SSBP4-202ENST00000348495 WBP2NLQ6ICG8 309 aa24.62■■□□□ 1.53
SSBP4-202ENST00000348495 TMEM179BQ7Z7N9 219 aa24.62■■□□□ 1.53
SSBP4-202ENST00000348495 EPYCQ99645 322 aa24.62■■□□□ 1.53
SSBP4-202ENST00000348495 FUZQ9BT04 418 aa24.62■■□□□ 1.53
SSBP4-202ENST00000348495 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP24.62■■□□□ 1.539e-7■■■□□ 18.5
SSBP4-202ENST00000348495 SAMHD1Q9Y3Z3 626 aaKnown RBP24.62■■□□□ 1.53
SSBP4-202ENST00000348495 U3KQV3 271 aa24.62■■□□□ 1.53
SSBP4-202ENST00000348495 PINLYPA6NC86 204 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 LRRC3CA6NJW4 275 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 GNB5O14775 395 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 CASQ2O14958 399 aaPredicted RBP24.61■■□□□ 1.53
SSBP4-202ENST00000348495 ELAVL4P26378 380 aaKnown RBP24.61■■□□□ 1.53
SSBP4-202ENST00000348495 MASP1P48740 699 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 ST3GAL3Q11203 375 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 FOXO1Q12778 655 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 PPP1R8Q12972 351 aaKnown RBP24.61■■□□□ 1.53
SSBP4-202ENST00000348495 CADM2Q8N3J6 435 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 OR1J4Q8NGS1 313 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 FAM173AQ9BQD7 235 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 GADD45GO95257 159 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 DNAJA1P31689 397 aaKnown RBP24.61■■□□□ 1.53
SSBP4-202ENST00000348495 IFNA8P32881 189 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 DLX5P56178 289 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 SESN3P58005 492 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 SMIM11AP58511 58 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 GK3PQ14409 553 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 QPRTQ15274 297 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 SULF2Q8IWU5 870 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 OR2M7Q8NG81 312 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 OR4K17Q8NGC6 315 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 OR52J3Q8NH60 311 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 EXTL1Q92935 676 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 ZNF597Q96LX8 424 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 C5orf34Q96MH7 638 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 ANKRD19PQ9H560 264 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 TUBA8Q9NY65 449 aaPredicted RBP24.61■■□□□ 1.53
SSBP4-202ENST00000348495 SLC7A7Q9UM01 511 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 KLF13Q9Y2Y9 288 aaPredicted RBP24.61■■□□□ 1.53
SSBP4-202ENST00000348495 PCDHGB7Q9Y5F8 929 aa24.61■■□□□ 1.53
SSBP4-202ENST00000348495 MKRN2OSH3BPM6 223 aa24.6■■□□□ 1.53
SSBP4-202ENST00000348495 TNFRSF11BO00300 401 aa24.6■■□□□ 1.53
SSBP4-202ENST00000348495 ETV2O00321 342 aaPredicted RBP24.6■■□□□ 1.53
SSBP4-202ENST00000348495 NUDT14O95848 222 aa24.6■■□□□ 1.53
SSBP4-202ENST00000348495 SLC1A3P43003 542 aa24.6■■□□□ 1.53
SSBP4-202ENST00000348495 CD97P48960 835 aa24.6■■□□□ 1.53
SSBP4-202ENST00000348495 ZNF766Q5HY98 468 aa24.6■■□□□ 1.53
SSBP4-202ENST00000348495 SWT1Q5T5J6 900 aaKnown RBP24.6■■□□□ 1.53
SSBP4-202ENST00000348495 ULK3Q6PHR2 472 aa24.6■■□□□ 1.53
SSBP4-202ENST00000348495 ARSKQ6UWY0 536 aa24.6■■□□□ 1.53
SSBP4-202ENST00000348495 SLC7A13Q8TCU3 470 aa24.6■■□□□ 1.53
SSBP4-202ENST00000348495 DNAJA4Q8WW22 397 aaPredicted RBP24.6■■□□□ 1.53
SSBP4-202ENST00000348495 TM9SF4Q92544 642 aa24.6■■□□□ 1.53
SSBP4-202ENST00000348495 C3orf49Q96BT1 292 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms