RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 OR5W2Q8NH69 310 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 ACOT11Q8WXI4 607 aaPredicted RBP14.75□□□□□ -0.05
HMGA1-202ENST00000347617 ALG8Q9BVK2 526 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 C1QTNF2Q9BXJ5 285 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 OR2AG1Q9H205 316 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 TICRRQ7Z2Z1 1910 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 PLXND1Q9Y4D7 1925 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 A0A0G2JK05 382 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 ANTXRLA6NF34 631 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 TMEM202A6NGA9 273 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 IGLON5A6NGN9 336 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 SLC9B1P1A6NJY1 282 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 L7N2F9 121 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 PLRG1O43660 514 aaKnown RBP14.75□□□□□ -0.05
HMGA1-202ENST00000347617 CFDP00746 253 aaPredicted RBP14.75□□□□□ -0.05
HMGA1-202ENST00000347617 WASP42768 502 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 CRYZQ08257 329 aaKnown RBP14.75□□□□□ -0.05
HMGA1-202ENST00000347617 HSPB3Q12988 150 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 EIF2B5Q13144 721 aaKnown RBP14.75□□□□□ -0.05
HMGA1-202ENST00000347617 IER5LQ5T953 404 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 OR5T2Q8NGG2 359 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 OR6M1Q8NGM8 313 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 SCARB1Q8WTV0 552 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 SMIM4Q8WVI0 70 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 FCRL4Q96PJ5 515 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 WFDC6Q9BQY6 131 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 NDC1Q9BTX1 674 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 C20orf85Q9H1P6 137 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 TTYH1Q9H313 450 aaPredicted RBP14.75□□□□□ -0.05
HMGA1-202ENST00000347617 ZCCHC4Q9H5U6 513 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 DDX31Q9H8H2 851 aaKnown RBP14.75□□□□□ -0.05
HMGA1-202ENST00000347617 NLGN3Q9NZ94 848 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 FBXL3Q9UKT7 428 aa14.75□□□□□ -0.05
HMGA1-202ENST00000347617 TRABD2BA6NFA1 517 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 G3V3Q6 166 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 PLPP1O14494 284 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 B4GALT2O60909 372 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 REM1O75628 298 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 POP7O75817 140 aaKnown RBP14.74□□□□□ -0.05
HMGA1-202ENST00000347617 PCDH8O95206 1070 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 RAB3BP20337 219 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 SHC1P29353 583 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 BSGP35613 385 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 BUD31P41223 144 aaPredicted RBP14.74□□□□□ -0.05
HMGA1-202ENST00000347617 VSX2P58304 361 aaPredicted RBP14.74□□□□□ -0.05
HMGA1-202ENST00000347617 ZP1P60852 638 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 KRT33BQ14525 404 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 TCTE1Q5JU00 501 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 PRAMEF14Q5SWL7 426 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 PRAMEF13Q5VWM6 474 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 ZNF620Q6ZNG0 422 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 MEPCEQ7L2J0 689 aaKnown RBP14.74□□□□□ -0.05
HMGA1-202ENST00000347617 CHMP1BQ7LBR1 199 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 NUDT13Q86X67 352 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 ZNF547Q8IVP9 402 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 OR4Q3Q8NH05 313 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 XAGE5Q8WWM1 108 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 DIO2Q92813 273 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 C12orf66Q96MD2 445 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 SFXN2Q96NB2 322 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 MS4A8Q9BY19 250 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 METTL17Q9H7H0 456 aaPredicted RBP14.74□□□□□ -0.05
HMGA1-202ENST00000347617 GPN1Q9HCN4 374 aaPredicted RBP14.74□□□□□ -0.05
HMGA1-202ENST00000347617 ZDHHC4Q9NPG8 344 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 NPDC1Q9NQX5 325 aaPredicted RBP14.74□□□□□ -0.05
HMGA1-202ENST00000347617 KLHL28Q9NXS3 571 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 COQ3Q9NZJ6 369 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 TRPC4Q9UBN4 977 aa14.74□□□□□ -0.05
HMGA1-202ENST00000347617 ING1Q9UK53 422 aaPredicted RBP14.74□□□□□ -0.05
HMGA1-202ENST00000347617 COL4A2P08572 1712 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 A0A1W2PP55 124 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 A0A1W2PQF6 199 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 PLSCR5A0PG75 271 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 PRAMEF27A3QJZ7 478 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 KLF4O43474 513 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 KCNJ13O60928 360 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 ASGR2P07307 311 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 GNSP15586 552 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 NDUFV2P19404 249 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 RAB3AP20336 220 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 SRP9P49458 86 aaKnown RBP14.73□□□□□ -0.05
HMGA1-202ENST00000347617 CDK3Q00526 305 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 BTN1A1Q13410 526 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 FZD5Q13467 585 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 C11orf96Q7Z7L8 435 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 FAM129CQ86XR2 697 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 TRAPPC5Q8IUR0 188 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 CFAP206Q8IYR0 622 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 ZNF687Q8N1G0 1237 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 ZNF527Q8NB42 609 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 LINC00052Q96N35 136 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 KCNK12Q9HB15 430 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 IFT46Q9NQC8 304 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 PPIEQ9UNP9 301 aaKnown RBP14.73□□□□□ -0.05
HMGA1-202ENST00000347617 SH2B3Q9UQQ2 575 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 PIAS3Q9Y6X2 628 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 DAPL1A0PJW8 107 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 HMSDA8MTL9 139 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 A8MUA0 341 aa14.73□□□□□ -0.05
HMGA1-202ENST00000347617 SNRPGP15A8MWD9 76 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms