RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 DCST2Q5T1A1 773 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 LAMTOR1Q6IAA8 161 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 CXXC5Q7LFL8 322 aaKnown RBP5.58□□□□□ -1.52
CLCN3-201ENST00000347613 FAM160A2Q8N612 972 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-201ENST00000347613 CLDN22Q8N7P3 220 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 ZNF321PQ8N8H1 164 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 OR13H1Q8NG92 308 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 NEIL3Q8TAT5 605 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 PHOSPHO2Q8TCD6 241 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 RSC1A1Q92681 617 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 OR2M4Q96R27 311 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 GFI1Q99684 422 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 KCNJ15Q99712 375 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 MESP1Q9BRJ9 268 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 S1PR5Q9H228 398 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 OR51V1Q9H2C8 321 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 NKX2-4Q9H2Z4 354 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 ADGRL4Q9HBW9 690 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 PAQR5Q9NXK6 330 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-201ENST00000347613 MAT2BQ9NZL9 334 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 SIGLEC7Q9Y286 467 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 ADAM18Q9Y3Q7 739 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 ZNF780BQ9Y6R6 833 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 SMG1Q96Q15 3661 aaKnown RBP5.58□□□□□ -1.52
CLCN3-201ENST00000347613 TRDV1A0A1B0GX56 115 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 FAM171A2A8MVW0 826 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 CACNB4O00305 520 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-201ENST00000347613 SYT5O00445 386 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 RNF13O43567 381 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 BPNT1O95861 308 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 ADH1BP00325 375 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 ANKRD34CP0C6C1 535 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 PTHLHP12272 177 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 IFI30P13284 250 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 CMPK1P30085 196 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 GABRA3P34903 492 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 SNRPD2P62316 118 aaKnown RBP5.58□□□□□ -1.52
CLCN3-201ENST00000347613 CRMP1Q14194 572 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 TIMM50Q3ZCQ8 353 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 KLHL12Q53G59 568 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 RNASE12Q5GAN4 147 aaKnown RBP5.58□□□□□ -1.52
CLCN3-201ENST00000347613 SNAP47Q5SQN1 464 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 ARMC4Q5T2S8 1044 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 PDZK1Q5T2W1 519 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 ZNF776Q68DI1 518 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-201ENST00000347613 FIGLAQ6QHK4 219 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 NPSR1Q6W5P4 371 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 GDPGP1Q6ZNW5 385 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 Q8N402 240 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 METTL27Q8N6F8 245 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-201ENST00000347613 OR4K14Q8NGD5 310 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 OR9A4Q8NGU2 314 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 NT5CQ8TCD5 201 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 SLC7A6Q92536 515 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 GAL3ST3Q96A11 431 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 TEAD3Q99594 435 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 NKX3-1Q99801 234 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-201ENST00000347613 GABRG3Q99928 467 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 TMEM106CQ9BVX2 250 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 PITHD1Q9GZP4 211 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-201ENST00000347613 MCCC2Q9HCC0 563 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 ALG5Q9Y673 324 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 FER1L5A0AVI2 2057 aa5.58□□□□□ -1.52
CLCN3-201ENST00000347613 CACNA1CQ13936 2221 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 OIP5O43482 229 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 RDH16O75452 317 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 PPP1R3DO95685 299 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 POU2F2P09086 479 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 HOXB2P14652 356 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 ST6GAL1P15907 406 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 MYL12AP19105 171 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 TPMTP51580 245 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 RPS11P62280 158 aaKnown RBP eCLIP5.57□□□□□ -1.52
CLCN3-201ENST00000347613 RPS15P62841 145 aaKnown RBP5.57□□□□□ -1.52
CLCN3-201ENST00000347613 ABATP80404 500 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 SLC3A1Q07837 685 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 PLA2G7Q13093 441 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 EFR3AQ14156 821 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 ITPRIPL2Q3MIP1 535 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 KLHL22Q53GT1 634 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 CEP78Q5JTW2 689 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 XKRXQ6PP77 449 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 USP53Q70EK8 1073 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 SCAIQ8N9R8 606 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 PIGXQ8TBF5 258 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 C17orf50Q8WW18 174 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 UFD1Q92890 307 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 CTHRC1Q96CG8 243 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 WDR89Q96FK6 387 aaPredicted RBP5.57□□□□□ -1.52
CLCN3-201ENST00000347613 RIPOR3Q96MK2 946 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 MS4A4EQ96PG1 132 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 MED18Q9BUE0 208 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 ALG8Q9BVK2 526 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 MTHFD2LQ9H903 347 aaPredicted RBP5.57□□□□□ -1.52
CLCN3-201ENST00000347613 ACTR10Q9NZ32 417 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 NLGN3Q9NZ94 848 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 CRNNQ9UBG3 495 aaPredicted RBP5.57□□□□□ -1.52
CLCN3-201ENST00000347613 COPS3Q9UNS2 423 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 SEC16AO15027 2179 aa5.57□□□□□ -1.52
CLCN3-201ENST00000347613 A0A1B0GTH9 108 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms