RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 TDGF1P13385 188 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 MYL12AP19105 171 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 RORAP35398 523 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 PPICP45877 212 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 RPS3AP61247 264 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ELAVL1Q15717 326 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 NSDHLQ15738 373 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 HLA-BQ31612 363 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 TIMM50Q3ZCQ8 353 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 KLHL26Q53HC5 615 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ULK3Q6PHR2 472 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 KIRREL2Q6UWL6 708 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 LINC00299Q6ZSB3 139 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SHFQ7M4L6 423 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 BBS1Q8NFJ9 593 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 OR4C6Q8NH72 309 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ZNF721Q8TF20 911 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 PIGKQ92643 395 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 RACGAP1Q9H0H5 632 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 PALMDQ9NP74 551 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 FGF20Q9NP95 211 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SUSD2Q9UGT4 822 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ADAMTS20P59510 1910 aa12.99□□□□□ -0.33
CDK5RAP1-202ENST00000346416 TRAV27A0A087WT01 109 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 LY6G6EA0A0G2JKS1 128 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 EFCAB7A8K855 629 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 BHLHE40O14503 412 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 TOX3O15405 576 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 PNLIPP16233 465 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 RBM34P42696 430 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 NR0B2Q15466 257 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 TMEM44Q2T9K0 475 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 PERM1Q5SV97 790 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 YOD1Q5VVQ6 348 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 NXNL2Q5VZ03 156 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 RPL13AP3Q6NVV1 102 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SMARCD3Q6STE5 483 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 THSD4Q6ZMP0 1018 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 LAPTM4BQ86VI4 370 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CPOQ8IVL8 374 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 OR51A7Q8NH64 312 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 HINT3Q9NQE9 182 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 PRMT8Q9NR22 394 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 RPS6KB2Q9UBS0 482 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CFL2Q9Y281 166 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 U3KQA8 63 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 TNRC6BQ9UPQ9 1833 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 NUP210LQ5VU65 1888 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 FAM183AA6NL82 134 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CLDN25C9JDP6 229 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 AGRPO00253 132 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SIGLEC6O43699 453 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 PFDN1O60925 122 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 MLLT11Q13015 90 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 TMED1Q13445 227 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 PLK5Q496M5 336 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SLC35F1Q5T1Q4 408 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 C16orf87Q6PH81 154 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 LINC00114Q6XXX2 140 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 LNX2Q8N448 690 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 KBTBD8Q8NFY9 601 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 OTULINQ96BN8 352 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 HSPBAP1Q96EW2 488 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 LCORQ96JN0 433 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 GAL3ST4Q96RP7 486 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 VN1R1Q9GZP7 353 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 UBQLN4Q9NRR5 601 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CHCHD3Q9NX63 227 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 GALNT8Q9NY28 637 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 MKL2Q9ULH7 1088 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SLC35A3Q9Y2D2 325 aa12.98□□□□□ -0.33
CDK5RAP1-202ENST00000346416 GNB5O14775 395 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 PTP4A3O75365 173 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 GPX5O75715 221 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 IL33O95760 270 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 HPGDP15428 266 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 IDUAP35475 653 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 RAB15P59190 212 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ZXDAP98168 799 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CRYZQ08257 329 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CXXC5Q7LFL8 322 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 OAFQ86UD1 273 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 GATSQ8NAP1 163 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 OR6Q1Q8NGQ2 317 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 MCFD2Q8NI22 146 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 EDAQ92838 391 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ADIPOR1Q96A54 375 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 IFT27Q9BW83 186 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 NUDT9Q9BW91 350 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 HOXD1Q9GZZ0 328 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 HMG20AQ9NP66 347 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 MKKSQ9NPJ1 570 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 AKIP1Q9NQ31 210 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 FBXO8Q9NRD0 319 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 H2AFY2Q9P0M6 372 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CTSFQ9UBX1 484 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 A0A1W2PQM1 296 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 TMEM129A0AVI4 362 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 FRG2CA6NGY1 282 aa12.97□□□□□ -0.33
CDK5RAP1-202ENST00000346416 WWP2O00308 870 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms