RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 ZNF222Q9UK12 451 aa12.34□□□□□ -0.43
CASC4-202ENST00000345795 RNF13O43567 381 aa12.33□□□□□ -0.43
CASC4-202ENST00000345795 IDH3BO43837 385 aa12.33□□□□□ -0.43
CASC4-202ENST00000345795 CPNE6O95741 557 aa12.33□□□□□ -0.43
CASC4-202ENST00000345795 MAKP20794 623 aa12.33□□□□□ -0.43
CASC4-202ENST00000345795 LEG1Q6P5S2 330 aa12.33□□□□□ -0.43
CASC4-202ENST00000345795 TMEM184AQ6ZMB5 413 aa12.33□□□□□ -0.43
CASC4-202ENST00000345795 NANOGNBQ7Z5D8 188 aa12.33□□□□□ -0.43
CASC4-202ENST00000345795 AKAP14Q86UN6 197 aa12.33□□□□□ -0.43
CASC4-202ENST00000345795 ACBD7Q8N6N7 88 aa12.33□□□□□ -0.43
CASC4-202ENST00000345795 PINK1Q9BXM7 581 aa12.33□□□□□ -0.43
CASC4-202ENST00000345795 CHIAQ9BZP6 476 aa12.33□□□□□ -0.43
CASC4-202ENST00000345795 UBQLN3Q9H347 655 aa12.33□□□□□ -0.43
CASC4-202ENST00000345795 UBE2ZQ9H832 354 aaPredicted RBP12.33□□□□□ -0.43
CASC4-202ENST00000345795 THSD1Q9NS62 852 aa12.33□□□□□ -0.43
CASC4-202ENST00000345795 NLKQ9UBE8 527 aa12.33□□□□□ -0.43
CASC4-202ENST00000345795 PEX16Q9Y5Y5 336 aa12.33□□□□□ -0.43
CASC4-202ENST00000345795 ACOD1A6NK06 481 aa12.33□□□□□ -0.44
CASC4-202ENST00000345795 TOXO94900 526 aa12.33□□□□□ -0.44
CASC4-202ENST00000345795 GSTM3P21266 225 aa12.33□□□□□ -0.44
CASC4-202ENST00000345795 LTBRP36941 435 aa12.33□□□□□ -0.44
CASC4-202ENST00000345795 CTXN1P60606 82 aa12.33□□□□□ -0.44
CASC4-202ENST00000345795 DMPKQ09013 629 aa12.33□□□□□ -0.44
CASC4-202ENST00000345795 C6orf183Q5T699 404 aa12.33□□□□□ -0.44
CASC4-202ENST00000345795 FCRL6Q6DN72 434 aa12.33□□□□□ -0.44
CASC4-202ENST00000345795 ZNF619Q8N2I2 560 aa12.33□□□□□ -0.44
CASC4-202ENST00000345795 TMEM99Q8N816 258 aa12.33□□□□□ -0.44
CASC4-202ENST00000345795 GPR119Q8TDV5 335 aa12.33□□□□□ -0.44
CASC4-202ENST00000345795 TSEN15Q8WW01 171 aaKnown RBP12.33□□□□□ -0.44
CASC4-202ENST00000345795 ADAD1Q96M93 576 aaKnown RBP12.33□□□□□ -0.44
CASC4-202ENST00000345795 ELL3Q9HB65 397 aaPredicted RBP12.33□□□□□ -0.44
CASC4-202ENST00000345795 A4GALTQ9NPC4 353 aa12.33□□□□□ -0.44
CASC4-202ENST00000345795 MRPS17Q9Y2R5 130 aaKnown RBP12.33□□□□□ -0.44
CASC4-202ENST00000345795 GABARAPO95166 117 aa12.33□□□□□ -0.44
CASC4-202ENST00000345795 OR2B6P58173 313 aa12.33□□□□□ -0.44
CASC4-202ENST00000345795 HNRNPKP61978 463 aaKnown RBP eCLIP12.33□□□□□ -0.44
CASC4-202ENST00000345795 MRPS21P82921 87 aaKnown RBP12.33□□□□□ -0.44
CASC4-202ENST00000345795 PON3Q15166 354 aa12.33□□□□□ -0.44
CASC4-202ENST00000345795 HES5Q5TA89 166 aa12.33□□□□□ -0.44
CASC4-202ENST00000345795 YIPF7Q8N8F6 280 aa12.33□□□□□ -0.44
CASC4-202ENST00000345795 NSMAFQ92636 917 aa12.33□□□□□ -0.44
CASC4-202ENST00000345795 SPATA9Q9BWV2 254 aa12.33□□□□□ -0.44
CASC4-202ENST00000345795 ULBP3Q9BZM4 244 aa12.33□□□□□ -0.44
CASC4-202ENST00000345795 C8orf33Q9H7E9 229 aaPredicted RBP12.33□□□□□ -0.44
CASC4-202ENST00000345795 TAF4O00268 1085 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 AKAP8O43823 692 aaKnown RBP12.32□□□□□ -0.44
CASC4-202ENST00000345795 MAS1P04201 325 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 DRD5P21918 477 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 BCKDHBP21953 392 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 WNT4P56705 351 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 ZNF33BQ06732 778 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 EIF2B5Q13144 721 aaKnown RBP12.32□□□□□ -0.44
CASC4-202ENST00000345795 C1orf94Q6P1W5 598 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 KANSL1Q7Z3B3 1105 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 SLC46A3Q7Z3Q1 461 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 NRARPQ7Z6K4 114 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 ABI3BPQ7Z7G0 1075 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 SAMD14Q8IZD0 417 aaPredicted RBP12.32□□□□□ -0.44
CASC4-202ENST00000345795 KATNB1Q9BVA0 655 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 HCAR1Q9BXC0 346 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 PALMDQ9NP74 551 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 FGF21Q9NSA1 209 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 EXTL2Q9UBQ6 330 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 PCDHGB6Q9Y5F9 930 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 MUC3AQ02505 3323 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 AKAP6Q13023 2319 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 PIEZO2Q9H5I5 2752 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 SPTY2D1-AS1A0A0U1RR47 76 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 GDF9O60383 454 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 SPARCP09486 303 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 PCMT1P22061 227 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 SHC1P29353 583 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 FAM199XQ6PEV8 388 aaPredicted RBP12.32□□□□□ -0.44
CASC4-202ENST00000345795 CBLN3Q6UW01 205 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 THSD4Q6ZMP0 1018 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 LANCL3Q6ZV70 420 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 RDH10Q8IZV5 341 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 EID2Q8N6I1 236 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 ZNF676Q8N7Q3 588 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 OR6Q1Q8NGQ2 317 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 C16orf52Q8NHV5 167 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 TRUB1Q8WWH5 349 aaKnown RBP12.32□□□□□ -0.44
CASC4-202ENST00000345795 HS6ST2Q96MM7 605 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 NDEL1Q9GZM8 345 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 ALKBH4Q9NXW9 302 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 MASP2O00187 686 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 EEF1E1O43324 174 aaKnown RBP12.32□□□□□ -0.44
CASC4-202ENST00000345795 HBQ1P09105 142 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 CLDN6P56747 220 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 MRPL28Q13084 256 aaKnown RBP12.32□□□□□ -0.44
CASC4-202ENST00000345795 PGGHGQ32M88 737 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 SYT6Q5T7P8 510 aaPredicted RBP12.32□□□□□ -0.44
CASC4-202ENST00000345795 MARCH3Q86UD3 253 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 BEST4Q8NFU0 473 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 CEP76Q8TAP6 659 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 Q96M85 177 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 NEDD4LQ96PU5 975 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 OR11A1Q9GZK7 315 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 NECTIN3Q9NQS3 549 aa12.32□□□□□ -0.44
CASC4-202ENST00000345795 GPC6Q9Y625 555 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms