RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 DHRS9Q9BPW9 319 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 CNPPD1Q9BV87 410 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 FNDC11Q9BVV2 318 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 ZNF350Q9GZX5 532 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 SAP130Q9H0E3 1048 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 QRSL1Q9H0R6 528 aaKnown RBP11.87□□□□□ -0.51
CLK3-201ENST00000345005 ZNF304Q9HCX3 659 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 POLE3Q9NRF9 147 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 NDUFB11Q9NX14 153 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 ERVK13-1Q9NX77 482 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 RHCGQ9UBD6 479 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 KLHL21Q9UJP4 597 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 ATXN7L1Q9ULK2 861 aaPredicted RBP11.87□□□□□ -0.51
CLK3-201ENST00000345005 CLDN16Q9Y5I7 305 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 FER1L5A0AVI2 2057 aa11.87□□□□□ -0.51
CLK3-201ENST00000345005 RALGAPA1Q6GYQ0 2036 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 A0A1B0GX78 115 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 M0R3H8 397 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 FAAHO00519 579 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 MTRF1O75570 445 aaKnown RBP11.86□□□□□ -0.51
CLK3-201ENST00000345005 ZIC2O95409 532 aaPredicted RBP11.86□□□□□ -0.51
CLK3-201ENST00000345005 EPPINO95925 133 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 IFNA16P05015 189 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 THBS1P07996 1170 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 SP9P0CG40 484 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 IL7P13232 177 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 MAOAP21397 527 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 FBLP22087 321 aaKnown RBP11.86□□□□□ -0.51
CLK3-201ENST00000345005 OR1D4P47884 311 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 DSG2Q14126 1118 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 ZNF267Q14586 743 aaPredicted RBP11.86□□□□□ -0.51
CLK3-201ENST00000345005 TBRG1Q3YBR2 411 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 EIPR1Q53HC9 387 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 SLC25A30Q5SVS4 291 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 PDZK1Q5T2W1 519 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 CASP12Q6UXS9 341 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 Q6ZPB1 254 aaPredicted RBP11.86□□□□□ -0.51
CLK3-201ENST00000345005 HMGN2P46Q86SG4 172 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 COMTD1Q86VU5 262 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 RDH10Q8IZV5 341 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 NLGN4XQ8N0W4 816 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 CACTIN-AS1Q8N1I8 211 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 ZNF619Q8N2I2 560 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 OR8J1Q8NGP2 316 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 ASB15Q8WXK1 588 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 FRMD6Q96NE9 622 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 PTCHD1Q96NR3 888 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 OPALINQ96PE5 141 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 OR5M11Q96RB7 305 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 ARHGDIGQ99819 225 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 LMF2Q9BU23 707 aaKnown RBP11.86□□□□□ -0.51
CLK3-201ENST00000345005 UCK2Q9BZX2 261 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 SRRQ9GZT4 340 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 FOLH1BQ9HBA9 442 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 EXOSC4Q9NPD3 245 aaKnown RBP11.86□□□□□ -0.51
CLK3-201ENST00000345005 LANCL2Q9NS86 450 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 DHCR7Q9UBM7 475 aaKnown RBP11.86□□□□□ -0.51
CLK3-201ENST00000345005 A4GNTQ9UNA3 340 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 SRPK3Q9UPE1 567 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 ZNF443Q9Y2A4 671 aaPredicted RBP11.86□□□□□ -0.51
CLK3-201ENST00000345005 A0A1W2PQM1 296 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 A0A1W2PRQ8 180 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 PRAMEF2O60811 474 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 SEMA7AO75326 666 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 DBIP07108 87 aaKnown RBP11.86□□□□□ -0.51
CLK3-201ENST00000345005 GUSBP08236 651 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 CKMT1AP12532 417 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 TNNI3P19429 210 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 IFNA8P32881 189 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 RPS19P39019 145 aaKnown RBP11.86□□□□□ -0.51
CLK3-201ENST00000345005 EMDP50402 254 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 DAB2P98082 770 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 ALDH6A1Q02252 535 aaKnown RBP11.86□□□□□ -0.51
CLK3-201ENST00000345005 FUT7Q11130 342 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 COX10Q12887 443 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 GPR68Q15743 365 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 SSX1Q16384 188 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 DDI2Q5TDH0 399 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 MZT2BQ6NZ67 158 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 QSOX2Q6ZRP7 698 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 TMPRSS9Q7Z410 1059 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 PLCZ1Q86YW0 608 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 TCTE3Q8IZS6 198 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 NANOGP1Q8N7R0 232 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 AQP11Q8NBQ7 271 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 OR6T1Q8NGN1 323 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 SLC7A6Q92536 515 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 SLC25A46Q96AG3 418 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 PRRC1Q96M27 445 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 WFDC6Q9BQY6 131 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 TMEM246Q9BRR3 403 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 HHATLQ9HCP6 504 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 RLIMQ9NVW2 624 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 C14orf119Q9NWQ9 140 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 STMN3Q9NZ72 180 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 LSM2Q9Y333 95 aaKnown RBP11.86□□□□□ -0.51
CLK3-201ENST00000345005 V9GYH0 126 aa11.86□□□□□ -0.51
CLK3-201ENST00000345005 COL5A1P20908 1838 aaPredicted RBP11.85□□□□□ -0.51
CLK3-201ENST00000345005 USP34Q70CQ2 3546 aa11.85□□□□□ -0.51
CLK3-201ENST00000345005 TRBV4-1A0A0J9YWV2 114 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms