RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 DOCK11Q5JSL3 2073 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 ZNF816-ZNF321PA0A0X1KG74 233 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 LRRC53A6NM62 1247 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 CXorf49A8MYA2 514 aaPredicted RBP9.37□□□□□ -0.91
ATXN3-201ENST00000340660 TRAPPC2LH3BP13 241 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 CLGNO14967 610 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 TO15178 435 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 TSPAN2O60636 221 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 SCELO95171 688 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 ITGA5P08648 1049 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 SLC35E2BP0CK96 405 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 ZNF12P17014 697 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 ADRA1DP25100 572 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 CALCRP30988 508 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 HOXD3P31249 432 aaPredicted RBP9.37□□□□□ -0.91
ATXN3-201ENST00000340660 MAGEA1P43355 309 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 MRPS11P82912 194 aaKnown RBP9.37□□□□□ -0.91
ATXN3-201ENST00000340660 POU3F1Q03052 451 aaPredicted RBP9.37□□□□□ -0.91
ATXN3-201ENST00000340660 DCTN2Q13561 401 aaKnown RBP9.37□□□□□ -0.91
ATXN3-201ENST00000340660 KRT31Q15323 416 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 NSUN5P1Q3KNT7 163 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 FBXW9Q5XUX1 488 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 TMIGD1Q6UXZ0 262 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 TRABD2AQ86V40 505 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 ADGRG3Q86Y34 549 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 TTLQ8NG68 377 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 OR7G1Q8NGA0 311 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 ZNF75CPQ92670 426 aaPredicted RBP9.37□□□□□ -0.91
ATXN3-201ENST00000340660 ZNF300Q96RE9 604 aaPredicted RBP9.37□□□□□ -0.91
ATXN3-201ENST00000340660 EHD1Q9H4M9 534 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 ZNF442Q9H7R0 627 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 PTGES2Q9H7Z7 377 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 LYARQ9NX58 379 aaKnown RBP9.37□□□□□ -0.91
ATXN3-201ENST00000340660 FOXJ3Q9UPW0 622 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 EFR3BQ9Y2G0 817 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 AMDHD2Q9Y303 409 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 TCAF1Q9Y4C2 921 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 POMT1Q9Y6A1 747 aa9.37□□□□□ -0.91
ATXN3-201ENST00000340660 IGHV3-15A0A0B4J1V0 119 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 GLOD5A6NK44 160 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 GMFGO60234 142 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 ZNF432O94892 652 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 PLA2G1BP04054 148 aaKnown RBP9.36□□□□□ -0.91
ATXN3-201ENST00000340660 SKILP12757 684 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 CD22P20273 847 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 HIST1H1TP22492 207 aaPredicted RBP9.36□□□□□ -0.91
ATXN3-201ENST00000340660 VAMP1P23763 118 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 PSMA4P25789 261 aaKnown RBP9.36□□□□□ -0.91
ATXN3-201ENST00000340660 EVI2BP34910 448 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 GIPRP48546 466 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 PRR5P85299 388 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 HGFACQ04756 655 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 OR7E24Q6IFN5 339 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 BRD3OSQ6XYD6 125 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 ZNF100Q8IYN0 542 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 NKAPQ8N5F7 415 aaKnown RBP9.36□□□□□ -0.91
ATXN3-201ENST00000340660 NUP37Q8NFH4 326 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 CPNE4Q96A23 557 aaPredicted RBP9.36□□□□□ -0.91
ATXN3-201ENST00000340660 KLHL15Q96M94 604 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 RCHY1Q96PM5 261 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 KATNB1Q9BVA0 655 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 CENPHQ9H3R5 247 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 NOX4Q9NPH5 578 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 VDAC3Q9Y277 283 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 ZDHHC9Q9Y397 364 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 INSIG2Q9Y5U4 225 aa9.36□□□□□ -0.91
ATXN3-201ENST00000340660 TRAV40A0A0B4J280 105 aa9.35□□□□□ -0.91
ATXN3-201ENST00000340660 ZC3H12DA2A288 527 aaKnown RBP9.35□□□□□ -0.91
ATXN3-201ENST00000340660 GOLGA8KD6RF30 607 aa9.35□□□□□ -0.91
ATXN3-201ENST00000340660 GOLGA8TH3BQL2 631 aa9.35□□□□□ -0.91
ATXN3-201ENST00000340660 NT5EP21589 574 aa9.35□□□□□ -0.91
ATXN3-201ENST00000340660 TCTEX1D4Q5JR98 221 aa9.35□□□□□ -0.91
ATXN3-201ENST00000340660 PDSS1Q5T2R2 415 aa9.35□□□□□ -0.91
ATXN3-201ENST00000340660 FRG2Q64ET8 278 aa9.35□□□□□ -0.91
ATXN3-201ENST00000340660 LHFPL2Q6ZUX7 228 aa9.35□□□□□ -0.91
ATXN3-201ENST00000340660 UBE2J2Q8N2K1 259 aa9.35□□□□□ -0.91
ATXN3-201ENST00000340660 GTPBP8Q8N3Z3 284 aaPredicted RBP9.35□□□□□ -0.91
ATXN3-201ENST00000340660 OTUD6BQ8N6M0 293 aa9.35□□□□□ -0.91
ATXN3-201ENST00000340660 CD200R1Q8TD46 325 aa9.35□□□□□ -0.91
ATXN3-201ENST00000340660 ADAMTS16Q8TE57 1224 aa9.35□□□□□ -0.91
ATXN3-201ENST00000340660 RAB8BQ92930 207 aa9.35□□□□□ -0.91
ATXN3-201ENST00000340660 PEX13Q92968 403 aa9.35□□□□□ -0.91
ATXN3-201ENST00000340660 R3HDM4Q96D70 268 aa9.35□□□□□ -0.91
ATXN3-201ENST00000340660 SLC38A2Q96QD8 506 aa9.35□□□□□ -0.91
ATXN3-201ENST00000340660 KCNS3Q9BQ31 491 aa9.35□□□□□ -0.91
ATXN3-201ENST00000340660 MRI1Q9BV20 369 aa9.35□□□□□ -0.91
ATXN3-201ENST00000340660 SORBS1Q9BX66 1292 aaKnown RBP9.35□□□□□ -0.91
ATXN3-201ENST00000340660 ROGDIQ9GZN7 287 aa9.35□□□□□ -0.91
ATXN3-201ENST00000340660 FBLN5Q9UBX5 448 aa9.35□□□□□ -0.91
ATXN3-201ENST00000340660 WIPI2Q9Y4P8 454 aa9.35□□□□□ -0.91
ATXN3-201ENST00000340660 PKHD1P08F94 4074 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 TRIM49D1C9J1S8 452 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 ANGPTL7O43827 346 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 TSPAN9O75954 239 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 CRYAAP02489 173 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 C8GP07360 202 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 DRD5P21918 477 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 GRIA1P42261 906 aa9.34□□□□□ -0.91
ATXN3-201ENST00000340660 MANFP55145 182 aaKnown RBP9.34□□□□□ -0.91
ATXN3-201ENST00000340660 NAP1L1P55209 391 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms