RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 CA5BQ9Y2D0 317 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 SLC6A5Q9Y345 797 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 WIF1Q9Y5W5 379 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 TMEM265A0A087WTH1 108 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 PIGBOS1A0A0B4J2F0 54 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 MRPL33O75394 65 aaKnown RBP11.07□□□□□ -0.64
SHANK2-201ENST00000338508 LAMP1P11279 417 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 KCNE1P15382 129 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 SLC35A2P78381 396 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 MAT1AQ00266 395 aaKnown RBP11.07□□□□□ -0.64
SHANK2-201ENST00000338508 IKZF1Q13422 519 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 CCNJQ5T5M9 372 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 TMEM184AQ6ZMB5 413 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 OR8J2Q8NGG1 315 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 APOOQ9BUR5 198 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 WDR6Q9NNW5 1121 aaKnown RBP11.07□□□□□ -0.64
SHANK2-201ENST00000338508 ZDHHC18Q9NUE0 388 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 MRPL22Q9NWU5 206 aaKnown RBP11.07□□□□□ -0.64
SHANK2-201ENST00000338508 NFS1Q9Y697 457 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 CBR1P16152 277 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 SBSNQ6UWP8 590 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 ZNF704Q6ZNC4 412 aaPredicted RBP11.07□□□□□ -0.64
SHANK2-201ENST00000338508 CCDC32Q9BV29 185 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 RDH14Q9HBH5 336 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 POM121CA8CG34 1229 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 VASPP50552 380 aaPredicted RBP11.07□□□□□ -0.64
SHANK2-201ENST00000338508 PRPS1P60891 318 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 OGFOD3Q6PK18 319 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 NETO1Q8TDF5 533 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 RAB39BQ96DA2 213 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 C4orf36Q96KX1 117 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 NMNAT2Q9BZQ4 307 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 TCEAL2Q9H3H9 227 aaPredicted RBP11.07□□□□□ -0.64
SHANK2-201ENST00000338508 INIPQ9NRY2 104 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 GNG12Q9UBI6 72 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 ZNF840PA6NDX5 716 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 SLC16A7O60669 478 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 SEC14L2O76054 403 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 OXSR1O95747 527 aaPredicted RBP11.07□□□□□ -0.64
SHANK2-201ENST00000338508 HNRNPFP52597 415 aaKnown RBP11.07□□□□□ -0.64
SHANK2-201ENST00000338508 EPHA5P54756 1037 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 TECRLQ5HYJ1 363 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 COQ5Q5HYK3 327 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 PNPLA1Q8N8W4 532 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 BEST4Q8NFU0 473 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 OR4A16Q8NH70 328 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 NPY6RQ99463 290 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 ZNF286AQ9HBT8 521 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 LRIT1Q9P2V4 623 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 OR6C65A6NJZ3 312 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 GRPP07492 148 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 CLDN6P56747 220 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 SLC39A5Q6ZMH5 540 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 VWA5B2Q8N398 1253 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 PQLC3Q8N755 202 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 COQ10AQ96MF6 247 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 NTPCRQ9BSD7 190 aaKnown RBP11.07□□□□□ -0.64
SHANK2-201ENST00000338508 NGBQ9NPG2 151 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 TMEM131LA2VDJ0 1609 aa11.07□□□□□ -0.64
SHANK2-201ENST00000338508 IGHV3-64DA0A0J9YX35 117 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 ARHGEF15O94989 841 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 GABRA5P31644 462 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 TTC9BQ8N6N2 239 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 NICN1Q9BSH3 213 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 DMAC2Q9NW81 257 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 RIMS3Q9UJD0 308 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 PPLO60437 1756 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 SOBPA7XYQ1 873 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 H3BMQ9 156 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 HSD17B6O14756 317 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 TRAF3IP2O43734 574 aaPredicted RBP11.06□□□□□ -0.64
SHANK2-201ENST00000338508 HPGDSO60760 199 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 NCR1O76036 304 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 SERPINF1P36955 418 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 CXCL12P48061 93 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 SPARTQ8N0X7 666 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 OR11L1Q8NGX0 322 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 TMEM9Q9P0T7 183 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 SLC6A14Q9UN76 642 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 FAM183AA6NL82 134 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 SURF4O15260 269 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 CEBPBP17676 345 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 ETV4P43268 484 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 SECTM1Q8WVN6 248 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 MS4A4EQ96PG1 132 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 OR6C1Q96RD1 312 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 C1QTNF6Q9BXI9 259 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 ULBP2Q9BZM5 246 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 NPFFR2Q9Y5X5 522 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 BHLHE40O14503 412 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 ARPC1BO15143 372 aaKnown RBP11.06□□□□□ -0.64
SHANK2-201ENST00000338508 BCAT2O15382 392 aaPredicted RBP11.06□□□□□ -0.64
SHANK2-201ENST00000338508 OR7C1O76099 320 aaPredicted RBP11.06□□□□□ -0.64
SHANK2-201ENST00000338508 NDUFB2O95178 105 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 CER1O95813 267 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 SNAI1O95863 264 aaPredicted RBP11.06□□□□□ -0.64
SHANK2-201ENST00000338508 F13BP05160 661 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 FGF3P11487 239 aaPredicted RBP11.06□□□□□ -0.64
SHANK2-201ENST00000338508 ACPPP15309 386 aa11.06□□□□□ -0.64
SHANK2-201ENST00000338508 PKLRP30613 574 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms