RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 METAP1DQ6UB28 335 aaPredicted RBP12.87□□□□□ -0.35
RTN4-202ENST00000337526 FAM83FQ8NEG4 500 aaPredicted RBP12.87□□□□□ -0.35
RTN4-202ENST00000337526 ADOQ96SZ5 270 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 TXNL4BQ9NX01 149 aaKnown RBP12.87□□□□□ -0.35
RTN4-202ENST00000337526 UBE2J1Q9Y385 318 aaPredicted RBP12.87□□□□□ -0.35
RTN4-202ENST00000337526 COL22A1Q8NFW1 1626 aaPredicted RBP12.87□□□□□ -0.35
RTN4-202ENST00000337526 A0A0J9YY10 115 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 MEIS3P1A6NDR6 274 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 H3BML4 177 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 UBL4AP11441 157 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 CST5P28325 142 aaPredicted RBP12.87□□□□□ -0.35
RTN4-202ENST00000337526 SQSTM1Q13501 440 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 EIF2B1Q14232 305 aaKnown RBP12.87□□□□□ -0.35
RTN4-202ENST00000337526 C3orf38Q5JPI3 329 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 SLC6A19Q695T7 634 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 Q6ZSR6 202 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 NOX3Q9HBY0 568 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 MAN2C1Q9NTJ4 1040 aa12.87□□□□□ -0.35
RTN4-202ENST00000337526 RBFOX1Q9NWB1 397 aaKnown RBP12.87□□□□□ -0.35
RTN4-202ENST00000337526 LILRB3O75022 631 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 TIMP1P01033 207 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 KNG1P01042 644 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 IFNA2P01563 188 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 ARF3P61204 181 aaPredicted RBP12.86□□□□□ -0.35
RTN4-202ENST00000337526 CSNK2A1P68400 391 aaPredicted RBP12.86□□□□□ -0.35
RTN4-202ENST00000337526 ARF1P84077 181 aaKnown RBP12.86□□□□□ -0.35
RTN4-202ENST00000337526 CTBSQ01459 385 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 IRF4Q15306 451 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 MRPL2Q5T653 305 aaKnown RBP12.86□□□□□ -0.35
RTN4-202ENST00000337526 C3orf33Q6P1S2 294 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 CLDN22Q8N7P3 220 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 CSNK2A3Q8NEV1 391 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 FGF13Q92913 245 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 INSM2Q96T92 566 aaPredicted RBP12.86□□□□□ -0.35
RTN4-202ENST00000337526 TIMM29Q9BSF4 260 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 NAA11Q9BSU3 229 aaPredicted RBP12.86□□□□□ -0.35
RTN4-202ENST00000337526 GDE1Q9NZC3 331 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 RCE1Q9Y256 329 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 RNF215Q9Y6U7 377 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 A8MVJ9 347 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 SDC3O75056 442 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 NCR1O76036 304 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 CRYZL1O95825 349 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 IFNA5P01569 189 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 AKAIN1P0CW23 69 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 ARRB2P32121 409 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 EIF2S3P41091 472 aaKnown RBP12.86□□□□□ -0.35
RTN4-202ENST00000337526 SLC6A11P48066 632 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 CXADRP78310 365 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 EEF1A1P5Q5VTE0 462 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 ZSCAN1Q8NBB4 408 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 KCTD12Q96CX2 325 aaKnown RBP12.86□□□□□ -0.35
RTN4-202ENST00000337526 CDC6Q99741 560 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 RARRES3Q9UL19 164 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 CACNG3O60359 315 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 FUCA1P04066 466 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 OR8U9P0C7N5 309 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 SSTR2P30874 369 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 XCR1P46094 333 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 RAB5BP61020 215 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 POU4F3Q15319 338 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 P2RY14Q15391 338 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 TMEM184AQ6ZMB5 413 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 C3P1Q6ZMU1 363 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 UEVLDQ8IX04 471 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 LILRA3Q8N6C8 439 aaPredicted RBP12.86□□□□□ -0.35
RTN4-202ENST00000337526 LILRB4Q8NHJ6 448 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 FAM71F1Q96KD3 344 aaPredicted RBP12.86□□□□□ -0.35
RTN4-202ENST00000337526 LMF2Q9BU23 707 aaKnown RBP12.86□□□□□ -0.35
RTN4-202ENST00000337526 POU2F3Q9UKI9 436 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 F8W036 122 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 SYNGR4O95473 234 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 RPS25P62851 125 aaKnown RBP12.86□□□□□ -0.35
RTN4-202ENST00000337526 BLOC1S1P78537 153 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 DLX2Q07687 328 aaPredicted RBP12.86□□□□□ -0.35
RTN4-202ENST00000337526 TDGQ13569 410 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 OR2M2Q96R28 347 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 SYT3Q9BQG1 590 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 BTBD2Q9BX70 525 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 AMBRA1Q9C0C7 1298 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 CCDC86Q9H6F5 360 aaKnown RBP12.86□□□□□ -0.35
RTN4-202ENST00000337526 HHATLQ9HCP6 504 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 PRDM9Q9NQV7 894 aa12.86□□□□□ -0.35
RTN4-202ENST00000337526 GPRIN2O60269 458 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 FZD7O75084 574 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 F11P03951 625 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 CA3P07451 260 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 JMJD7P0C870 316 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 ARSBP15848 533 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 GPR50Q13585 617 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 LRRC26Q2I0M4 334 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 OTUD1Q5VV17 481 aaPredicted RBP12.85□□□□□ -0.35
RTN4-202ENST00000337526 HACD4Q5VWC8 232 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 GAREM2Q75VX8 874 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 FCRLAQ7L513 359 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 MCATQ8IVS2 390 aaKnown RBP12.85□□□□□ -0.35
RTN4-202ENST00000337526 OR13C2Q8NGS9 318 aa12.85□□□□□ -0.35
RTN4-202ENST00000337526 UHRF1Q96T88 793 aaPredicted RBP12.85□□□□□ -0.35
RTN4-202ENST00000337526 MED17Q9NVC6 651 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms