RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 SLC16A11Q8NCK7 471 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 NUP43Q8NFH3 380 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 SLC22A8Q8TCC7 542 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 ZC3HAV1LQ96H79 300 aaKnown RBP12.91□□□□□ -0.34
SF1-202ENST00000334944 LRR1Q96L50 414 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 OR7D2Q96RA2 312 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 OR51J1Q9H342 316 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 TRPV4Q9HBA0 871 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 FKBP7Q9Y680 259 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 CENPVL1A0A0U1RR11 272 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 A0A1W2PQF6 199 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 SHISA3A0PJX4 238 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 GMDSO60547 372 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 ZIC2O95409 532 aaPredicted RBP12.91□□□□□ -0.34
SF1-202ENST00000334944 IL1AP01583 271 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 DRD2P14416 443 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 DRD5P21918 477 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 BMP8BP34820 402 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.91□□□□□ -0.34
SF1-202ENST00000334944 SRSF5Q13243 272 aaKnown RBP12.91□□□□□ -0.34
SF1-202ENST00000334944 CAMK2DQ13557 499 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 ZNF311Q5JNZ3 666 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 PRSS41Q7RTY9 318 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 VN1R4Q7Z5H5 301 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 BMP8AQ7Z5Y6 402 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 TRIM69Q86WT6 500 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 SLC30A8Q8IWU4 369 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 NXPE2Q96DL1 559 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 TIMM29Q9BSF4 260 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 TBC1D17Q9HA65 648 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 WDR87Q6ZQQ6 2873 aa12.91□□□□□ -0.34
SF1-202ENST00000334944 ATG2AQ2TAZ0 1938 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 EEF1E1O43324 174 aaKnown RBP12.9□□□□□ -0.34
SF1-202ENST00000334944 PLRG1O43660 514 aaKnown RBP12.9□□□□□ -0.34
SF1-202ENST00000334944 SSNA1O43805 119 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 PRICKLE3O43900 615 aaPredicted RBP12.9□□□□□ -0.34
SF1-202ENST00000334944 NDUFS6O75380 124 aaKnown RBP12.9□□□□□ -0.34
SF1-202ENST00000334944 SIX6O95475 246 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 TRHRP34981 398 aaPredicted RBP12.9□□□□□ -0.34
SF1-202ENST00000334944 ETV5P41161 510 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 KHKP50053 298 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 CCR6P51684 374 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 TAS2R41P59536 307 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 DEFA5Q01523 94 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 ILKQ13418 452 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 ZNF600Q6ZNG1 722 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 OTULINQ96BN8 352 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 FAM46AQ96IP4 442 aaKnown RBP12.9□□□□□ -0.34
SF1-202ENST00000334944 COPZ2Q9P299 210 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 P2RX6O15547 441 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 F3P13726 295 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 CSNK2A2P19784 350 aaPredicted RBP12.9□□□□□ -0.34
SF1-202ENST00000334944 NTSR1P30989 418 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 SOX18P35713 384 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 RFX3P48380 749 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 PDX1P52945 283 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 FABP5Q01469 135 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 SLC48A1Q6P1K1 146 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 HSDL2Q6YN16 418 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 NUDT18Q6ZVK8 323 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 DENND4AQ7Z401 1863 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 HDDC2Q7Z4H3 204 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 PIGKQ92643 395 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 WDR89Q96FK6 387 aaPredicted RBP12.9□□□□□ -0.34
SF1-202ENST00000334944 SFXN2Q96NB2 322 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 OR2M4Q96R27 311 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 DDOQ99489 341 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 TMED9Q9BVK6 235 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 SRMSQ9H3Y6 488 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 FOLH1BQ9HBA9 442 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 STARD5Q9NSY2 213 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 TAS2R7Q9NYW3 318 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 OR6C2Q9NZP2 312 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 ADAM29Q9UKF5 820 aa12.9□□□□□ -0.34
SF1-202ENST00000334944 A0A087WUU8 490 aa12.9□□□□□ -0.35
SF1-202ENST00000334944 NPIPA5A0A0B4J1W7 369 aa12.9□□□□□ -0.35
SF1-202ENST00000334944 TEX13CA0A0J9YWL9 993 aa12.9□□□□□ -0.35
SF1-202ENST00000334944 NPIPA7E9PJI5 369 aa12.9□□□□□ -0.35
SF1-202ENST00000334944 CTSVO60911 334 aa12.9□□□□□ -0.35
SF1-202ENST00000334944 POU2F2P09086 479 aa12.9□□□□□ -0.35
SF1-202ENST00000334944 NPIPA8P0DM63 369 aa12.9□□□□□ -0.35
SF1-202ENST00000334944 RAB3AP20336 220 aa12.9□□□□□ -0.35
SF1-202ENST00000334944 CMPK1P30085 196 aa12.9□□□□□ -0.35
SF1-202ENST00000334944 HAAOP46952 286 aa12.9□□□□□ -0.35
SF1-202ENST00000334944 SELENOPP49908 381 aa12.9□□□□□ -0.35
SF1-202ENST00000334944 TSPAN5P62079 268 aa12.9□□□□□ -0.35
SF1-202ENST00000334944 HYAL1Q12794 435 aa12.9□□□□□ -0.35
SF1-202ENST00000334944 MTSS1LQ765P7 747 aa12.9□□□□□ -0.35
SF1-202ENST00000334944 PRICKLE2Q7Z3G6 844 aa12.9□□□□□ -0.35
SF1-202ENST00000334944 TMEM151BQ8IW70 566 aa12.9□□□□□ -0.35
SF1-202ENST00000334944 OR7G2Q8NG99 324 aa12.9□□□□□ -0.35
SF1-202ENST00000334944 ELP4Q96EB1 424 aa12.9□□□□□ -0.35
SF1-202ENST00000334944 METTL17Q9H7H0 456 aaPredicted RBP12.9□□□□□ -0.35
SF1-202ENST00000334944 NT5DC2Q9H857 520 aa12.9□□□□□ -0.35
SF1-202ENST00000334944 EXTL2Q9UBQ6 330 aa12.9□□□□□ -0.35
SF1-202ENST00000334944 MRPS2Q9Y399 296 aaKnown RBP12.9□□□□□ -0.35
SF1-202ENST00000334944 PCDHGB7Q9Y5F8 929 aa12.9□□□□□ -0.35
SF1-202ENST00000334944 MFSD2BA6NFX1 497 aa12.89□□□□□ -0.35
SF1-202ENST00000334944 TBX19O60806 448 aa12.89□□□□□ -0.35
SF1-202ENST00000334944 DHFRP00374 187 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms