RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 DPH7Q9BTV6 452 aa12.78□□□□□ -0.36
SYNE3-201ENST00000334258 PINK1Q9BXM7 581 aa12.78□□□□□ -0.36
SYNE3-201ENST00000334258 CRISPLD2Q9H0B8 497 aa12.78□□□□□ -0.36
SYNE3-201ENST00000334258 ARPC1BO15143 372 aaKnown RBP12.78□□□□□ -0.36
SYNE3-201ENST00000334258 POP7O75817 140 aaKnown RBP12.78□□□□□ -0.36
SYNE3-201ENST00000334258 TIMP2P16035 220 aa12.78□□□□□ -0.36
SYNE3-201ENST00000334258 POU3F2P20265 443 aaPredicted RBP12.78□□□□□ -0.36
SYNE3-201ENST00000334258 GALP22466 123 aa12.78□□□□□ -0.36
SYNE3-201ENST00000334258 MAZP56270 477 aaKnown RBP12.78□□□□□ -0.36
SYNE3-201ENST00000334258 ERVK-21P61565 698 aa12.78□□□□□ -0.36
SYNE3-201ENST00000334258 TPRA1Q86W33 373 aa12.78□□□□□ -0.36
SYNE3-201ENST00000334258 CPXM2Q8N436 756 aa12.78□□□□□ -0.36
SYNE3-201ENST00000334258 ACOT11Q8WXI4 607 aaPredicted RBP12.78□□□□□ -0.36
SYNE3-201ENST00000334258 C4orf36Q96KX1 117 aa12.78□□□□□ -0.36
SYNE3-201ENST00000334258 UBQLN3Q9H347 655 aa12.78□□□□□ -0.36
SYNE3-201ENST00000334258 IL20Q9NYY1 176 aa12.78□□□□□ -0.36
SYNE3-201ENST00000334258 KIF25Q9UIL4 384 aa12.78□□□□□ -0.36
SYNE3-201ENST00000334258 PCOLCE2Q9UKZ9 415 aa12.78□□□□□ -0.36
SYNE3-201ENST00000334258 KCNMB2Q9Y691 235 aa12.78□□□□□ -0.36
SYNE3-201ENST00000334258 ABHD14A-ACY1A0A1B0GW23 586 aa12.77□□□□□ -0.36
SYNE3-201ENST00000334258 RAB19A4D1S5 217 aa12.77□□□□□ -0.36
SYNE3-201ENST00000334258 ANTXRLA6NF34 631 aa12.77□□□□□ -0.36
SYNE3-201ENST00000334258 GMDSO60547 372 aa12.77□□□□□ -0.36
SYNE3-201ENST00000334258 NFATC1O95644 943 aa12.77□□□□□ -0.36
SYNE3-201ENST00000334258 BMP7P18075 431 aa12.77□□□□□ -0.36
SYNE3-201ENST00000334258 MMP15P51511 669 aa12.77□□□□□ -0.36
SYNE3-201ENST00000334258 CCR8P51685 355 aa12.77□□□□□ -0.36
SYNE3-201ENST00000334258 BAMBIQ13145 260 aa12.77□□□□□ -0.36
SYNE3-201ENST00000334258 IKZF1Q13422 519 aa12.77□□□□□ -0.36
SYNE3-201ENST00000334258 HSD17B12Q53GQ0 312 aa12.77□□□□□ -0.36
SYNE3-201ENST00000334258 ZNF620Q6ZNG0 422 aa12.77□□□□□ -0.36
SYNE3-201ENST00000334258 LRRTM4Q86VH4 590 aa12.77□□□□□ -0.36
SYNE3-201ENST00000334258 GJD3Q8N144 294 aa12.77□□□□□ -0.36
SYNE3-201ENST00000334258 OR52L1Q8NGH7 329 aa12.77□□□□□ -0.36
SYNE3-201ENST00000334258 RAD51AP1Q96B01 352 aa12.77□□□□□ -0.36
SYNE3-201ENST00000334258 RGMAQ96B86 450 aa12.77□□□□□ -0.36
SYNE3-201ENST00000334258 MS4A8Q9BY19 250 aa12.77□□□□□ -0.36
SYNE3-201ENST00000334258 SLC6A17Q9H1V8 727 aa12.77□□□□□ -0.36
SYNE3-201ENST00000334258 ACSS1Q9NUB1 689 aaPredicted RBP12.77□□□□□ -0.36
SYNE3-201ENST00000334258 A0A0G2JPF8 293 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 HNRNPCL3B7ZW38 293 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 HNRNPCL4P0DMR1 293 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 BTF3P20290 206 aaKnown RBP12.77□□□□□ -0.37
SYNE3-201ENST00000334258 FPR3P25089 353 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 PSMB5P28074 263 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 PSMA6P60900 246 aaKnown RBP12.77□□□□□ -0.37
SYNE3-201ENST00000334258 FZD5Q13467 585 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 MPP7Q5T2T1 576 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 SFRP5Q5T4F7 317 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 FCRLBQ6BAA4 426 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 TMEM25Q86YD3 366 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 GID4Q8IVV7 300 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 KREMEN2Q8NCW0 462 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 THAP4Q8WY91 577 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 GHSRQ92847 366 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 AK6Q9Y3D8 172 aaKnown RBP12.77□□□□□ -0.37
SYNE3-201ENST00000334258 SCN8AQ9UQD0 1980 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 KPNA3O00505 521 aaPredicted RBP12.77□□□□□ -0.37
SYNE3-201ENST00000334258 KHDRBS3O75525 346 aaKnown RBP12.77□□□□□ -0.37
SYNE3-201ENST00000334258 KDM4BO94953 1096 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 PLATP00750 562 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 UGT2B7P16662 529 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 ATF1P18846 271 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 FUT1P19526 365 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 TPMTP51580 245 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 OR12D2P58182 307 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 MEPCEQ7L2J0 689 aaKnown RBP12.77□□□□□ -0.37
SYNE3-201ENST00000334258 CACUL1Q86Y37 369 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 SETD7Q8WTS6 366 aaKnown RBP12.77□□□□□ -0.37
SYNE3-201ENST00000334258 MACROD1Q9BQ69 325 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 SLC46A2Q9BY10 475 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 MED17Q9NVC6 651 aa12.77□□□□□ -0.37
SYNE3-201ENST00000334258 TCRBV16S1A1N1A0A5B0 115 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 CDC42EP2O14613 210 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 FLRT2O43155 660 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 NDUFS4O43181 175 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 APOC3P02656 99 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 EPCAMP16422 314 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 PSMB1P20618 241 aaKnown RBP12.76□□□□□ -0.37
SYNE3-201ENST00000334258 NFYAP23511 347 aaPredicted RBP12.76□□□□□ -0.37
SYNE3-201ENST00000334258 TAS2R38P59533 333 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 BDH1Q02338 343 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 PRPF38BQ5VTL8 546 aaKnown RBP12.76□□□□□ -0.37
SYNE3-201ENST00000334258 ASTLQ6HA08 431 aaPredicted RBP12.76□□□□□ -0.37
SYNE3-201ENST00000334258 FAM129CQ86XR2 697 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 DIO2Q92813 273 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 INTS12Q96CB8 462 aaKnown RBP12.76□□□□□ -0.37
SYNE3-201ENST00000334258 DPH1Q9BZG8 443 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 CACYBPQ9HB71 228 aaKnown RBP12.76□□□□□ -0.37
SYNE3-201ENST00000334258 IL21Q9HBE4 155 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 BCL2L10Q9HD36 194 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 LINC00587B1AMM8 73 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 ARPC5O15511 151 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 TBX6O95947 436 aaPredicted RBP12.76□□□□□ -0.37
SYNE3-201ENST00000334258 GLAP06280 429 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 GPR1P46091 355 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 RAG2P55895 527 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 SHC2P98077 582 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 HTR4Q13639 388 aa12.76□□□□□ -0.37
SYNE3-201ENST00000334258 ZNF273Q14593 569 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms