RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 HEATR5AQ86XA9 2040 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 SPTY2D1-AS1A0A0U1RR47 76 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 DAPL1A0PJW8 107 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 IGHA1P01876 353 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 STX4Q12846 297 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 PRPF38BQ5VTL8 546 aaKnown RBP17.49■□□□□ 0.39
RFTN1-201ENST00000334133 CNIH2Q6PI25 160 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 MEPCEQ7L2J0 689 aaKnown RBP17.49■□□□□ 0.39
RFTN1-201ENST00000334133 RFLNBQ8N5W9 214 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 ACBD7Q8N6N7 88 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 GATSQ8NAP1 163 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 SENP5Q96HI0 755 aaPredicted RBP17.49■□□□□ 0.39
RFTN1-201ENST00000334133 WDFY2Q96P53 400 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 TIMP4Q99727 224 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 MAP3K3Q99759 626 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 C11orf54Q9H0W9 315 aaPredicted RBP17.49■□□□□ 0.39
RFTN1-201ENST00000334133 SIGLEC7Q9Y286 467 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 ENTPD2Q9Y5L3 495 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 A0A087WV62 115 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 SHISA7A6NL88 538 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 SERPINI2O75830 405 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 SLC3A1Q07837 685 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 CRYZQ08257 329 aaKnown RBP17.49■□□□□ 0.39
RFTN1-201ENST00000334133 RAB30Q15771 203 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 NR2C2APQ86WQ0 139 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 CDK20Q8IZL9 346 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 LRRC17Q8N6Y2 441 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 ASXL3Q9C0F0 2248 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 TMEM27Q9HBJ8 222 aa17.49■□□□□ 0.39
RFTN1-201ENST00000334133 TRDV1A0A1B0GX56 115 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 TTC36A6NLP5 189 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 PRR23D1E9PI22 279 aaPredicted RBP17.48■□□□□ 0.39
RFTN1-201ENST00000334133 DYRK3O43781 588 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 PRR23D2P0DMB1 279 aaPredicted RBP17.48■□□□□ 0.39
RFTN1-201ENST00000334133 E2F1Q01094 437 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 KRR1Q13601 381 aaKnown RBP17.48■□□□□ 0.39
RFTN1-201ENST00000334133 AGAP6Q5VW22 663 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 ZNF517Q6ZMY9 492 aaPredicted RBP17.48■□□□□ 0.39
RFTN1-201ENST00000334133 OAFQ86UD1 273 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 MCATQ8IVS2 390 aaKnown RBP17.48■□□□□ 0.39
RFTN1-201ENST00000334133 BRIX1Q8TDN6 353 aaKnown RBP17.48■□□□□ 0.39
RFTN1-201ENST00000334133 RIT1Q92963 219 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 CTHRC1Q96CG8 243 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 RBM18Q96H35 190 aaKnown RBP17.48■□□□□ 0.39
RFTN1-201ENST00000334133 AGAP4Q96P64 663 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 LMF1Q96S06 567 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 BEX2Q9BXY8 128 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 GRIP1Q9Y3R0 1128 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 VPS13AQ96RL7 3174 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 A0A1W2PPK0 400 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 IMPA2O14732 288 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 HLA-DPB1P04440 258 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 ACVR1BP36896 505 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 COPZ1P61923 177 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 CCINQ13939 588 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 KISS1RQ969F8 398 aaPredicted RBP17.48■□□□□ 0.39
RFTN1-201ENST00000334133 ITFG2Q969R8 447 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 STACQ99469 402 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 FN3KQ9H479 309 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 FOLH1BQ9HBA9 442 aa17.48■□□□□ 0.39
RFTN1-201ENST00000334133 LRP4O75096 1905 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 J3QLW9 94 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 POLR1CO15160 346 aaPredicted RBP17.47■□□□□ 0.39
RFTN1-201ENST00000334133 CHRNB1P11230 501 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 ZNF19P17023 458 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 RAB38P57729 211 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 SCN1BQ07699 218 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 SFSWAPQ12872 951 aaKnown RBP17.47■□□□□ 0.39
RFTN1-201ENST00000334133 IL18Q14116 193 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 ALG10BQ5I7T1 473 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 CD200R1LQ6Q8B3 271 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 C7orf57Q8NEG2 295 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 TEAD3Q99594 435 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 RNF32Q9H0A6 362 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 MED17Q9NVC6 651 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 LRIT1Q9P2V4 623 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 SATB2Q9UPW6 733 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 HS3ST3A1Q9Y663 406 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 PCDH15Q96QU1 1955 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 GMFGO60234 142 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 S1PR1P21453 382 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 FGF9P31371 208 aaPredicted RBP17.47■□□□□ 0.39
RFTN1-201ENST00000334133 ZNF362Q5T0B9 420 aaPredicted RBP17.47■□□□□ 0.39
RFTN1-201ENST00000334133 LNX2Q8N448 690 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 RCBTB1Q8NDN9 531 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 OR13C5Q8NGS8 318 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 CAPSLQ8WWF8 208 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 DNAJA3Q96EY1 480 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 ATF6BQ99941 703 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 LRRC61Q9BV99 259 aa17.47■□□□□ 0.39
RFTN1-201ENST00000334133 MAP3K8P41279 467 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 HTR3AP46098 478 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 GPR50Q13585 617 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 IDNKQ5T6J7 187 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 SDR9C7Q8NEX9 313 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 OR4K13Q8NH42 304 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 TWSG1Q9GZX9 223 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 MAU2Q9Y6X3 613 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 ABCA7Q8IZY2 2146 aa17.46■□□□□ 0.39
RFTN1-201ENST00000334133 KIR2DS5A0A0G2JLQ3 304 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms