RNA–Protein interactions for RNA: ENST00000332118.10

SRPRA-201, Transcript of SRP receptor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPRA, Length 3,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-201ENST00000332118 RFPL3O75679 317 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 PSMA1P25786 263 aaKnown RBP12.57□□□□□ -0.4
SRPRA-201ENST00000332118 CSF2RBP32927 897 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 MAT1AQ00266 395 aaKnown RBP12.57□□□□□ -0.4
SRPRA-201ENST00000332118 GGTLC2Q14390 218 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 ZNF181Q2M3W8 571 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 RGS21Q2M5E4 152 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 ZNF721Q8TF20 911 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 MMABQ96EY8 250 aaPredicted RBP12.57□□□□□ -0.4
SRPRA-201ENST00000332118 HINT3Q9NQE9 182 aaKnown RBP12.57□□□□□ -0.4
SRPRA-201ENST00000332118 C2orf92A0A1B0GVN3 265 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 SERINC4A6NH21 518 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 RHPN2P1A8MT19 583 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 DUX1O43812 170 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 HCN1O60741 890 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 MYL12AP19105 171 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 MAOBP27338 520 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 RGS19P49795 217 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 CDH11P55287 796 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 DCAF7P61962 342 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 MLLT1Q03111 559 aaPredicted RBP12.57□□□□□ -0.4
SRPRA-201ENST00000332118 COL9A2Q14055 689 aaPredicted RBP12.57□□□□□ -0.4
SRPRA-201ENST00000332118 INAQ16352 499 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 C16orf87Q6PH81 154 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 CENPSQ8N2Z9 138 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 TMCO5AQ8N6Q1 288 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 DNAJA4Q8WW22 397 aaPredicted RBP12.57□□□□□ -0.4
SRPRA-201ENST00000332118 TRMT61AQ96FX7 289 aaKnown RBP12.57□□□□□ -0.4
SRPRA-201ENST00000332118 SAMD8Q96LT4 415 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 BRWD1Q9NSI6 2320 aa12.57□□□□□ -0.4
SRPRA-201ENST00000332118 IGLV3-12A0A075B6K2 115 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 NPIPA5A0A0B4J1W7 369 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 NPIPA7E9PJI5 369 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 DDAH2O95865 285 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 NPIPA8P0DM63 369 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 MAOAP21397 527 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 CDC20Q12834 499 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 PAQR6Q6TCH4 344 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 MEPCEQ7L2J0 689 aaKnown RBP12.56□□□□□ -0.4
SRPRA-201ENST00000332118 BMP8AQ7Z5Y6 402 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 SLC35F3Q8IY50 421 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 ZNF441Q8N8Z8 693 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 DPH1Q9BZG8 443 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 MCCC2Q9HCC0 563 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 PRMT8Q9NR22 394 aaPredicted RBP12.56□□□□□ -0.4
SRPRA-201ENST00000332118 ERVK13-1Q9NX77 482 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 CAB39Q9Y376 341 aaPredicted RBP12.56□□□□□ -0.4
SRPRA-201ENST00000332118 A0A1W2PQD3 144 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 CKMT1AP12532 417 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 SOX3P41225 446 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 CXCL12P48061 93 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 GPR143P51810 404 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 VASNQ6EMK4 673 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 SLC25A46Q96AG3 418 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 ZNF501Q96CX3 271 aaPredicted RBP12.56□□□□□ -0.4
SRPRA-201ENST00000332118 DDOQ99489 341 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 CHCHD6Q9BRQ6 235 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 TMEM43Q9BTV4 400 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 RNF167Q9H6Y7 350 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 ASB6Q9NWX5 421 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 CHRNA9Q9UGM1 479 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 ERVK-19Q9WJR5 959 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 TRDV1A0A1B0GX56 115 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 OR6C76A6NM76 312 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 UPK1BO75841 260 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 IFI30P13284 250 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 SOX6P35712 828 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 ELAVL1Q15717 326 aaKnown RBP12.56□□□□□ -0.4
SRPRA-201ENST00000332118 SOWAHCQ53LP3 525 aaPredicted RBP12.56□□□□□ -0.4
SRPRA-201ENST00000332118 PRPF38BQ5VTL8 546 aaKnown RBP12.56□□□□□ -0.4
SRPRA-201ENST00000332118 CXXC5Q7LFL8 322 aaKnown RBP12.56□□□□□ -0.4
SRPRA-201ENST00000332118 CDK20Q8IZL9 346 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 OR52L1Q8NGH7 329 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 OR1L3Q8NH93 324 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 SYNDIG1Q9H7V2 258 aa12.56□□□□□ -0.4
SRPRA-201ENST00000332118 KPNA4O00629 521 aaPredicted RBP12.55□□□□□ -0.4
SRPRA-201ENST00000332118 POLR1CO15160 346 aaPredicted RBP12.55□□□□□ -0.4
SRPRA-201ENST00000332118 EFNA3P52797 238 aa12.55□□□□□ -0.4
SRPRA-201ENST00000332118 SKP2Q13309 424 aa12.55□□□□□ -0.4
SRPRA-201ENST00000332118 ZNF267Q14586 743 aaPredicted RBP12.55□□□□□ -0.4
SRPRA-201ENST00000332118 MEX3DQ86XN8 651 aaKnown RBP12.55□□□□□ -0.4
SRPRA-201ENST00000332118 DEFB119Q8N690 84 aa12.55□□□□□ -0.4
SRPRA-201ENST00000332118 PLPP5Q8NEB5 264 aa12.55□□□□□ -0.4
SRPRA-201ENST00000332118 BARHL1Q9BZE3 327 aa12.55□□□□□ -0.4
SRPRA-201ENST00000332118 PPIEQ9UNP9 301 aaKnown RBP12.55□□□□□ -0.4
SRPRA-201ENST00000332118 GPR52Q9Y2T5 361 aa12.55□□□□□ -0.4
SRPRA-201ENST00000332118 TDRD6O60522 2096 aaKnown RBP12.55□□□□□ -0.4
SRPRA-201ENST00000332118 PCDH15Q96QU1 1955 aa12.55□□□□□ -0.4
SRPRA-201ENST00000332118 CARTPTQ16568 116 aa12.55□□□□□ -0.4
SRPRA-201ENST00000332118 THSD4Q6ZMP0 1018 aa12.55□□□□□ -0.4
SRPRA-201ENST00000332118 WDR5BQ86VZ2 330 aa12.55□□□□□ -0.4
SRPRA-201ENST00000332118 LSRQ86X29 649 aaPredicted RBP12.55□□□□□ -0.4
SRPRA-201ENST00000332118 KNL1Q8NG31 2342 aa12.55□□□□□ -0.4
SRPRA-201ENST00000332118 CDX2Q99626 313 aaPredicted RBP12.55□□□□□ -0.4
SRPRA-201ENST00000332118 ENKD1Q9H0I2 346 aa12.55□□□□□ -0.4
SRPRA-201ENST00000332118 SP140LQ9H930 580 aa12.55□□□□□ -0.4
SRPRA-201ENST00000332118 ATP13A2Q9NQ11 1180 aa12.55□□□□□ -0.4
SRPRA-201ENST00000332118 TXNL4BQ9NX01 149 aaKnown RBP12.55□□□□□ -0.4
SRPRA-201ENST00000332118 EXPH5Q8NEV8 1989 aa12.55□□□□□ -0.4
SRPRA-201ENST00000332118 LY6G6EA0A0G2JKS1 128 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms