RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 CLDN16Q9Y5I7 305 aa13.72□□□□□ -0.21
CLCNKA-201ENST00000331433 SEC16AO15027 2179 aa13.72□□□□□ -0.21
CLCNKA-201ENST00000331433 HEATR5AQ86XA9 2040 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 IGHV1OR15-9A0A0B4J2B8 117 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 LINC00854A0A1B0GVQ3 168 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 TRDV1A0A1B0GX56 115 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 SHISA3A0PJX4 238 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 SLC35F4A4IF30 521 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 CD8B2A6NJW9 211 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 CASKO14936 926 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 HRO43593 1189 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 CHP2O43745 196 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 NCR1O76036 304 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 MRPL3P09001 348 aaKnown RBP13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 CLUP10909 449 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 CD8BP10966 210 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 NDUFAF6Q330K2 333 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 FAM131AQ6UXB0 335 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 CADM2Q8N3J6 435 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 CYB561A3Q8NBI2 242 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 ATP6V1C2Q8NEY4 427 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 NLGN4YQ8NFZ3 816 aaPredicted RBP13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 LMX1AQ8TE12 382 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 PMM1Q92871 262 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 DIRAS2Q96HU8 199 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 PRTFDC1Q9NRG1 225 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 CMC2Q9NRP2 79 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 C14orf105Q9NVL8 296 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 FBXL4Q9UKA2 621 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 TMEM5Q9Y2B1 443 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 C2orf92A0A1B0GVN3 265 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 FAM86C2PA6NEL3 165 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 GABRPO00591 440 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 PRKNO60260 465 aaPredicted RBP13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 CTNSO60931 367 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 PPP1R3DO95685 299 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 APOA1P02647 267 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 PROS1P07225 676 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 IL9P15248 144 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 GFERP55789 205 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 ALG10BQ5I7T1 473 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 MARCH9Q86YJ5 346 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 ACBD7Q8N6N7 88 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 OR10H4Q8NGA5 316 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 SMAP2Q8WU79 429 aaPredicted RBP13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 MMABQ96EY8 250 aaPredicted RBP13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 TNFRSF13CQ96RJ3 184 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 TIMP4Q99727 224 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 ALG8Q9BVK2 526 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 FN3KQ9H479 309 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 FBXL21Q9UKT6 434 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 ERVK-19Q9WJR5 959 aa13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 TMEM184BQ9Y519 407 aaPredicted RBP13.71□□□□□ -0.21
CLCNKA-201ENST00000331433 MN1Q10571 1320 aaPredicted RBP13.71□□□□□ -0.22
CLCNKA-201ENST00000331433 PRR23D1E9PI22 279 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 SRPX2O60687 465 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 PTP4A3O75365 173 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 PRR23D2P0DMB1 279 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 CTBP2P56545 445 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 KRR1Q13601 381 aaKnown RBP13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 TAB1Q15750 504 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 GLYR1Q49A26 553 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 DDI2Q5TDH0 399 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 NRARPQ7Z6K4 114 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 OAFQ86UD1 273 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 TDHQ8IZJ6 230 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 NEIL3Q8TAT5 605 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 TCTN2Q96GX1 697 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 DGAT2Q96PD7 388 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 SLC38A3Q99624 504 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 MARCH7Q9H992 704 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 LMAN1LQ9HAT1 526 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 INIPQ9NRY2 104 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 LRIT1Q9P2V4 623 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 MRPS33Q9Y291 106 aaKnown RBP13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 SIRT4Q9Y6E7 314 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 ABCA7Q8IZY2 2146 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 A0A1W2PQ09 198 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 CSF2P04141 144 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 HLA-DPB1P04440 258 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 GYPBP06028 91 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 IL7P13232 177 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 CRYZQ08257 329 aaKnown RBP13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 ACSM1Q08AH1 577 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 SELENBP1Q13228 472 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 CRMP1Q14194 572 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 ELOCQ15369 112 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 ZNF362Q5T0B9 420 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 RPL13AP3Q6NVV1 102 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 KIRREL2Q6UWL6 708 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 C16orf52Q8NHV5 167 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 TGM7Q96PF1 710 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 JAM3Q9BX67 310 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 SOHLH2Q9NX45 425 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 COMMD3Q9UBI1 195 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 CA14Q9ULX7 337 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 CACNA1IQ9P0X4 2223 aa13.7□□□□□ -0.22
CLCNKA-201ENST00000331433 FABP12A6NFH5 140 aa13.69□□□□□ -0.22
CLCNKA-201ENST00000331433 HCN1O60741 890 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms