RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 VSTM2LQ96N03 204 aa13.45□□□□□ -0.26
TPM3-206ENST00000330188 AGAP4Q96P64 663 aa13.45□□□□□ -0.26
TPM3-206ENST00000330188 TBX5Q99593 518 aa13.45□□□□□ -0.26
TPM3-206ENST00000330188 ATF6BQ99941 703 aa13.45□□□□□ -0.26
TPM3-206ENST00000330188 ORAI3Q9BRQ5 295 aa13.45□□□□□ -0.26
TPM3-206ENST00000330188 ZNF426Q9BUY5 554 aa13.45□□□□□ -0.26
TPM3-206ENST00000330188 WSB2Q9NYS7 404 aaPredicted RBP13.45□□□□□ -0.26
TPM3-206ENST00000330188 COMMD3Q9UBI1 195 aa13.45□□□□□ -0.26
TPM3-206ENST00000330188 NDRG2Q9UN36 371 aaKnown RBP13.45□□□□□ -0.26
TPM3-206ENST00000330188 SLC22A31A6NKX4 558 aa13.44□□□□□ -0.26
TPM3-206ENST00000330188 FOXS1O43638 330 aa13.44□□□□□ -0.26
TPM3-206ENST00000330188 HCN1O60741 890 aa13.44□□□□□ -0.26
TPM3-206ENST00000330188 TMCC2O75069 709 aa13.44□□□□□ -0.26
TPM3-206ENST00000330188 NCR1O76036 304 aa13.44□□□□□ -0.26
TPM3-206ENST00000330188 NGFRP08138 427 aa13.44□□□□□ -0.26
TPM3-206ENST00000330188 RNH1P13489 461 aaKnown RBP13.44□□□□□ -0.26
TPM3-206ENST00000330188 GALP22466 123 aa13.44□□□□□ -0.26
TPM3-206ENST00000330188 SSTR4P31391 388 aa13.44□□□□□ -0.26
TPM3-206ENST00000330188 MAZP56270 477 aaKnown RBP13.44□□□□□ -0.26
TPM3-206ENST00000330188 OR2B6P58173 313 aa13.44□□□□□ -0.26
TPM3-206ENST00000330188 SCN1BQ07699 218 aa13.44□□□□□ -0.26
TPM3-206ENST00000330188 TAB1Q15750 504 aa13.44□□□□□ -0.26
TPM3-206ENST00000330188 ZNF362Q5T0B9 420 aaPredicted RBP13.44□□□□□ -0.26
TPM3-206ENST00000330188 FCRLBQ6BAA4 426 aa13.44□□□□□ -0.26
TPM3-206ENST00000330188 PARGQ86W56 976 aa13.44□□□□□ -0.26
TPM3-206ENST00000330188 OR51A7Q8NH64 312 aa13.44□□□□□ -0.26
TPM3-206ENST00000330188 RIT1Q92963 219 aa13.44□□□□□ -0.26
TPM3-206ENST00000330188 ITFG2Q969R8 447 aa13.44□□□□□ -0.26
TPM3-206ENST00000330188 KLHDC7BQ96G42 594 aa13.44□□□□□ -0.26
TPM3-206ENST00000330188 PEX11GQ96HA9 241 aa13.44□□□□□ -0.26
TPM3-206ENST00000330188 BABAM2Q9NXR7 383 aa13.44□□□□□ -0.26
TPM3-206ENST00000330188 GRIP1Q9Y3R0 1128 aa13.44□□□□□ -0.26
TPM3-206ENST00000330188 SIRT4Q9Y6E7 314 aaPredicted RBP13.44□□□□□ -0.26
TPM3-206ENST00000330188 BRWD1Q9NSI6 2320 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 C2orf92A0A1B0GVN3 265 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 SYNDIG1LA6NDD5 238 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 GTPBP1O00178 669 aaKnown RBP13.43□□□□□ -0.26
TPM3-206ENST00000330188 DVL2O14641 736 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 SEC14L5O43304 696 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 CDC123O75794 336 aaPredicted RBP13.43□□□□□ -0.26
TPM3-206ENST00000330188 GLULP15104 373 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 IL9P15248 144 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 SLC2A5P22732 501 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 NOS3P29474 1203 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 RBM34P42696 430 aaKnown RBP13.43□□□□□ -0.26
TPM3-206ENST00000330188 BLKP51451 505 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 IGLV3-21P80748 117 aaPredicted RBP13.43□□□□□ -0.26
TPM3-206ENST00000330188 STX4Q12846 297 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 ASAH1Q13510 395 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 FHL1Q13642 323 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 FAM53BQ14153 422 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 GALEQ14376 348 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 NPSR1Q6W5P4 371 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 UBQLNLQ8IYU4 475 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 ART5Q96L15 291 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 TEAD3Q99594 435 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 NPAP1Q9NZP6 1156 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 SLC35A3Q9Y2D2 325 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 LINC00854A0A1B0GVQ3 168 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 DAPL1A0PJW8 107 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 HRO43593 1189 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 HPGDSO60760 199 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 CTNSO60931 367 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 REM1O75628 298 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 RGS9O75916 674 aaPredicted RBP13.43□□□□□ -0.26
TPM3-206ENST00000330188 PPP1R3DO95685 299 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 MAT1AQ00266 395 aaKnown RBP13.43□□□□□ -0.26
TPM3-206ENST00000330188 CSTF1Q05048 431 aaKnown RBP13.43□□□□□ -0.26
TPM3-206ENST00000330188 CRMP1Q14194 572 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 KCNJ8Q15842 424 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 ZNF141Q15928 474 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 PYDC2Q56P42 97 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 ALG10BQ5I7T1 473 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.43□□□□□ -0.26
TPM3-206ENST00000330188 GATAD2AQ86YP4 633 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 LSMEM1Q8N8F7 131 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 OR10H4Q8NGA5 316 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 TNFRSF13CQ96RJ3 184 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 SOSTQ9BQB4 213 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 TRIM2Q9C040 744 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 RNF32Q9H0A6 362 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 OR51V1Q9H2C8 321 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 MCCC2Q9HCC0 563 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 INPP5EQ9NRR6 644 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.43□□□□□ -0.26
TPM3-206ENST00000330188 C2orf42Q9NWW7 574 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 CLDN16Q9Y5I7 305 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 EYSQ5T1H1 3165 aa13.43□□□□□ -0.26
TPM3-206ENST00000330188 CLUP10909 449 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 HTR3AP46098 478 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 RPS7P62081 194 aaKnown RBP13.42□□□□□ -0.26
TPM3-206ENST00000330188 MADCAM1Q13477 382 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 ERV3-1Q14264 604 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 FGFBP1Q14512 234 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 LINC00114Q6XXX2 140 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 ZNF517Q6ZMY9 492 aaPredicted RBP13.42□□□□□ -0.26
TPM3-206ENST00000330188 NCCRP1Q6ZVX7 275 aaPredicted RBP13.42□□□□□ -0.26
TPM3-206ENST00000330188 OAFQ86UD1 273 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 ZNF595Q8IYB9 648 aa13.42□□□□□ -0.26
TPM3-206ENST00000330188 RCBTB1Q8NDN9 531 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms