RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 JUNBP17275 347 aaPredicted RBP17.2■□□□□ 0.34
EXOSC3-201ENST00000327304 CHMP24386 653 aa17.2■□□□□ 0.34
EXOSC3-201ENST00000327304 IFNGR2P38484 337 aa17.2■□□□□ 0.34
EXOSC3-201ENST00000327304 ALDH6A1Q02252 535 aaKnown RBP17.2■□□□□ 0.34
EXOSC3-201ENST00000327304 CHAF1BQ13112 559 aa17.2■□□□□ 0.34
EXOSC3-201ENST00000327304 PTGES3Q15185 160 aaKnown RBP17.2■□□□□ 0.34
EXOSC3-201ENST00000327304 ZSWIM7Q19AV6 140 aa17.2■□□□□ 0.34
EXOSC3-201ENST00000327304 FLYWCH1Q4VC44 716 aa17.2■□□□□ 0.34
EXOSC3-201ENST00000327304 BRIX1Q8TDN6 353 aaKnown RBP17.2■□□□□ 0.34
EXOSC3-201ENST00000327304 THOC3Q96J01 351 aaKnown RBP17.2■□□□□ 0.34
EXOSC3-201ENST00000327304 CCNL2Q96S94 520 aaPredicted RBP17.2■□□□□ 0.34
EXOSC3-201ENST00000327304 ADOQ96SZ5 270 aa17.2■□□□□ 0.34
EXOSC3-201ENST00000327304 TUBA1CQ9BQE3 449 aa17.2■□□□□ 0.34
EXOSC3-201ENST00000327304 FLRT3Q9NZU0 649 aa17.2■□□□□ 0.34
EXOSC3-201ENST00000327304 DKK4Q9UBT3 224 aa17.2■□□□□ 0.34
EXOSC3-201ENST00000327304 RNF6Q9Y252 685 aa17.2■□□□□ 0.34
EXOSC3-201ENST00000327304 PCDHGA10Q9Y5H3 936 aa17.2■□□□□ 0.34
EXOSC3-201ENST00000327304 ARGFXA6NJG6 315 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 CPSF4LA6NMK7 179 aaKnown RBP17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 TSPAN2O60636 221 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 FMO6PO60774 539 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 ST13P50502 369 aaKnown RBP17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 RNF144AP50876 292 aaPredicted RBP17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 ZNF136P52737 540 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 NRG3P56975 720 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 CDC20Q12834 499 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 FOXD4Q12950 439 aaPredicted RBP17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 ZBED5Q49AG3 693 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 MRPL2Q5T653 305 aaKnown RBP17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 Q6ZPB1 254 aaPredicted RBP17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 PLEKHM3Q6ZWE6 761 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 SIRT6Q8N6T7 355 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 RHOXF1Q8NHV9 184 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 FAM81AQ8TBF8 368 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 THAP4Q8WY91 577 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 FER1L6-AS2Q96M78 137 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 DPH1Q9BZG8 443 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 DUSP21Q9H596 190 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 CDCP1Q9H5V8 836 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 NPFFR2Q9Y5X5 522 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 NINQ8N4C6 2090 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 ACACAQ13085 2346 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 A0A087WUU8 490 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 CLDN24A6NM45 220 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 WBP4O75554 376 aaKnown RBP17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 ITGA10O75578 1167 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 GSTM3P21266 225 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 IL12BP29460 328 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 PSMD4P55036 377 aaKnown RBP17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 CDC42P60953 191 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 AIMP2Q13155 320 aaKnown RBP17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 CNPY1Q3B7I2 92 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 B3GNTL1Q67FW5 361 aaPredicted RBP17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 H3F3CQ6NXT2 135 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 LYPD8Q6UX82 237 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 GPR141Q7Z602 305 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 ZER1Q7Z7L7 766 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 RPS19BP1Q86WX3 136 aaKnown RBP17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 GRAMD2AQ8IUY3 354 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 SPARTQ8N0X7 666 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 APH1BQ8WW43 257 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 PSMF1Q92530 271 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 RASL10BQ96S79 203 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 CCNB1IP1Q9NPC3 277 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 ATP13A2Q9NQ11 1180 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 CTPS2Q9NRF8 586 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 MRTO4Q9UKD2 239 aaKnown RBP17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 CEPT1Q9Y6K0 416 aa17.19■□□□□ 0.34
EXOSC3-201ENST00000327304 ZFHX4Q86UP3 3567 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 DOCK10Q96BY6 2186 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 IGF2RP11717 2491 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 MED13Q9UHV7 2174 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 NPIPB9F8W1W9 429 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 MPZL2O60487 215 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 FMO3P31513 532 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 KRT20P35900 424 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 MLF1P58340 268 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 PSPHP78330 225 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 SLC35A2P78381 396 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 P3H2Q8IVL5 708 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 ARMC10Q8N2F6 343 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 OR4C3Q8NH37 302 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 SLC22A8Q8TCC7 542 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 IPCEF1Q8WWN9 437 aaPredicted RBP17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 OIT3Q8WWZ8 545 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 ACOT11Q8WXI4 607 aaPredicted RBP17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 SLC35B4Q969S0 331 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 TMIGD2Q96BF3 282 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 SLC41A3Q96GZ6 507 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 NODALQ96S42 347 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 PRR14Q9BWN1 585 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 ZBTB20Q9HC78 741 aaPredicted RBP17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 RASSF1Q9NS23 344 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 PLCXD1Q9NUJ7 323 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 TESQ9UGI8 421 aaKnown RBP17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 PCDHGB1Q9Y5G3 927 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 SNX5Q9Y5X3 404 aa17.18■□□□□ 0.34
EXOSC3-201ENST00000327304 XPNPEP2O43895 674 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 PPM1BO75688 479 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 UTS2O95399 124 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms