RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.76□□□□□ -0.53
DDX39A-202ENST00000324340 ZNF404Q494X3 552 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 ZFP69Q49AA0 526 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 ZNF691Q5VV52 312 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 FIGNL1Q6PIW4 674 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 RFPL4BQ6ZWI9 263 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 SLC29A4Q7RTT9 530 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 GRAMD2AQ8IUY3 354 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 CCDC28AQ8IWP9 274 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 UBQLNLQ8IYU4 475 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 AMER2Q8N7J2 671 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 BCORP1Q8N888 145 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 OR52P1PQ8NH57 321 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 MCFD2Q8NI22 146 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 NUBPLQ8TB37 319 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 SPPL2AQ8TCT8 520 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 OIT3Q8WWZ8 545 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 LCORQ96JN0 433 aaPredicted RBP11.76□□□□□ -0.53
DDX39A-202ENST00000324340 G6PC3Q9BUM1 346 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 GPR87Q9BY21 358 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 WWTR1Q9GZV5 400 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 ZNF700Q9H0M5 742 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 QRSL1Q9H0R6 528 aaKnown RBP11.76□□□□□ -0.53
DDX39A-202ENST00000324340 TRIM45Q9H8W5 580 aaPredicted RBP11.76□□□□□ -0.53
DDX39A-202ENST00000324340 SCN3BQ9NY72 215 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 DLL3Q9NYJ7 618 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 TCFL5Q9UL49 500 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 ABCG2Q9UNQ0 655 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 CAB39Q9Y376 341 aaPredicted RBP11.76□□□□□ -0.53
DDX39A-202ENST00000324340 PCDHGA10Q9Y5H3 936 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 PEX16Q9Y5Y5 336 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 HS3ST3B1Q9Y662 390 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 PMF1-BGLAPU3KQ54 211 aa11.76□□□□□ -0.53
DDX39A-202ENST00000324340 IGHV1-45A0A0A0MS14 117 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 HMX3A6NHT5 357 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 METTL15A6NJ78 407 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 NPIPB9F8W1W9 429 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 STMND1H3BQB6 276 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 GFRA3O60609 400 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 RAD1O60671 282 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 ICMTO60725 284 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 LGI1O95970 557 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 CST1P01037 141 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 DBIP07108 87 aaKnown RBP11.75□□□□□ -0.53
DDX39A-202ENST00000324340 YES1P07947 543 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 PRKACBP22694 351 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 NR4A1P22736 598 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 LCN1P31025 176 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 ISL1P61371 349 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 RNF4P78317 190 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 GABREP78334 506 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 PPP2R2BQ00005 443 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 SSPNQ14714 243 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 ZNF311Q5JNZ3 666 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 FAM69BQ5VUD6 431 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 ZAR1Q86SH2 424 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 COMTD1Q86VU5 262 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 CLIP4Q8N3C7 705 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 LSMEM1Q8N8F7 131 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 C8orf44Q96CB5 159 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 TMCO6Q96DC7 493 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 ARHGDIGQ99819 225 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 AMBRA1Q9C0C7 1298 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 NXF5Q9H1B4 397 aaKnown RBP11.75□□□□□ -0.53
DDX39A-202ENST00000324340 TOR3AQ9H497 397 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 NDUFAF4Q9P032 175 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 KCNE5Q9UJ90 142 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 CDV3Q9UKY7 258 aaKnown RBP11.75□□□□□ -0.53
DDX39A-202ENST00000324340 FARSAQ9Y285 508 aaKnown RBP11.75□□□□□ -0.53
DDX39A-202ENST00000324340 OR10H1Q9Y4A9 318 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 CHST2Q9Y4C5 530 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 PCDHGA6Q9Y5G7 932 aa11.75□□□□□ -0.53
DDX39A-202ENST00000324340 WDR87Q6ZQQ6 2873 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 EP300Q09472 2414 aaPredicted RBP11.74□□□□□ -0.53
DDX39A-202ENST00000324340 hCG_2039718K7EN88 272 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 SOCS6O14544 535 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 TRIM3O75382 744 aaPredicted RBP11.74□□□□□ -0.53
DDX39A-202ENST00000324340 UGT2B17O75795 530 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 DXOO77932 396 aaKnown RBP11.74□□□□□ -0.53
DDX39A-202ENST00000324340 IL33O95760 270 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 IFNW1P05000 195 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 COX6A1P12074 109 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 NID1P14543 1247 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 ITGA2P17301 1181 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 TNFRSF1BP20333 461 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 HTR3AP46098 478 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 OR1E2P47887 323 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 RPS15P62841 145 aaKnown RBP11.74□□□□□ -0.53
DDX39A-202ENST00000324340 EEF1A1P68104 462 aaKnown RBP11.74□□□□□ -0.53
DDX39A-202ENST00000324340 MRPS15P82914 257 aaKnown RBP11.74□□□□□ -0.53
DDX39A-202ENST00000324340 EMX1Q04741 257 aaPredicted RBP11.74□□□□□ -0.53
DDX39A-202ENST00000324340 CD47Q08722 323 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 GPR68Q15743 365 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 NPTX1Q15818 432 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 ZNF141Q15928 474 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 MAPK14Q16539 360 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 DECR1Q16698 335 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 YIF1BQ5BJH7 314 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 HLA-DQA1Q5Y7H0 255 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 STEAP3Q658P3 488 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms