RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 VIMP08670 466 aaKnown RBP13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 IGFBP2P18065 325 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 PGCP20142 388 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 CAPN3P20807 821 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 PGM1P36871 562 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 MVDP53602 400 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 CRISP3P54108 245 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 KCNJ10P78508 379 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 FOXF2Q12947 444 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 TOMM34Q15785 309 aaPredicted RBP13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 POMZP3Q6PJE2 187 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 PEX5LQ8IYB4 626 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 ACBD4Q8NC06 268 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 OR10D3Q8NH80 312 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 OR2V1Q8NHB1 315 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 FNDC9Q8TBE3 224 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 TMEM234Q8WY98 164 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 FIG4Q92562 907 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 ZG16BQ96DA0 208 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 KLHL15Q96M94 604 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 CACYBPQ9HB71 228 aaKnown RBP13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 FGFR1OP2Q9NVK5 253 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 FOXD3Q9UJU5 478 aaPredicted RBP13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 MCTS1Q9ULC4 181 aaKnown RBP13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 A0A1W2PP18 115 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 SYT5O00445 386 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 TNFSF11O14788 317 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 ADAMDEC1O15204 470 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 SYNGR4O95473 234 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 CRHP06850 196 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 DBIP07108 87 aaKnown RBP13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 PRF1P14222 555 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 IL7RP16871 459 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 IL11P20809 199 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 PPIBP23284 216 aaKnown RBP13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 SSTR2P30874 369 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 SFTPDP35247 375 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 PEX19P40855 299 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 GUCY1A3Q02108 690 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 FADDQ13158 208 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 SELENBP1Q13228 472 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 FBXL19-AS1Q494R0 122 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 METTL21CQ5VZV1 264 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 HBMQ6B0K9 141 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 DMRTC2Q8IXT2 367 aaPredicted RBP13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 CMIPQ8IY22 773 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 CNEP1R1Q8N9A8 125 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 FAM71CQ8NEG0 241 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 ATP6V1C2Q8NEY4 427 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 ZNF563Q8TA94 476 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 WDR60Q8WVS4 1066 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 ST8SIA1Q92185 356 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 RNASE6Q93091 150 aaKnown RBP13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 TREX2Q9BQ50 279 aaPredicted RBP13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 TMEM120AQ9BXJ8 343 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 TRIM8Q9BZR9 551 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 PIGMQ9H3S5 423 aa13.18□□□□□ -0.3
TUBA3D-201ENST00000321253 MED12LQ86YW9 2145 aa13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 ITPR2Q14571 2701 aa13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 A0A1W2PNV4 684 aa13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 CXCL13O43927 109 aa13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 TFPTP0C1Z6 253 aa13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 RYKP34925 604 aa13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 SLC6A8P48029 635 aa13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 CPA2P48052 419 aa13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 RGNQ15493 299 aa13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 CTU2Q2VPK5 515 aaKnown RBP13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 SLC25A53Q5H9E4 307 aa13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 PAGE3Q5JUK9 113 aa13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 LRIF1Q5T3J3 769 aa13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 SLC38A5Q8WUX1 472 aa13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 ADGRG7Q96K78 797 aa13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 RNF122Q9H9V4 155 aa13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 SLC52A3Q9NQ40 469 aa13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 TIGARQ9NQ88 270 aa13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 EXOSC3Q9NQT5 275 aaKnown RBP13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 LEF1Q9UJU2 399 aaPredicted RBP13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 PACSIN3Q9UKS6 424 aa13.17□□□□□ -0.3
TUBA3D-201ENST00000321253 HEATR5AQ86XA9 2040 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 A0A0J9YW62 118 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 CLDN24A6NM45 220 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 ANGPT2O15123 496 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 DNAJA2O60884 412 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 NTN1O95631 604 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 PLGP00747 810 aaPredicted RBP13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 NID1P14543 1247 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 RPS4Y1P22090 263 aaKnown RBP13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 SLC7A1P30825 629 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 ARFIP2P53365 341 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 CARD18P57730 90 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 SESN3P58005 492 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 MERTKQ12866 999 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 MYBPHQ13203 477 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 TMEM176BQ3YBM2 270 aaPredicted RBP13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 C3orf33Q6P1S2 294 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 LUZP2Q86TE4 346 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 KIF18BQ86Y91 864 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 OR52P1PQ8NH57 321 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms