RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 GID4Q8IVV7 300 aa16.13■□□□□ 0.17
COL9A1-201ENST00000320755 SAMD12Q8N8I0 201 aa16.13■□□□□ 0.17
COL9A1-201ENST00000320755 OR4N2Q8NGD1 307 aa16.13■□□□□ 0.17
COL9A1-201ENST00000320755 TNFRSF13CQ96RJ3 184 aa16.13■□□□□ 0.17
COL9A1-201ENST00000320755 MEPEQ9NQ76 525 aaPredicted RBP16.13■□□□□ 0.17
COL9A1-201ENST00000320755 ZNF223Q9UK11 482 aaPredicted RBP16.13■□□□□ 0.17
COL9A1-201ENST00000320755 RGS9O75916 674 aaPredicted RBP16.13■□□□□ 0.17
COL9A1-201ENST00000320755 SMIM10L1P0DMW3 83 aa16.13■□□□□ 0.17
COL9A1-201ENST00000320755 ZNF10P21506 573 aaPredicted RBP16.13■□□□□ 0.17
COL9A1-201ENST00000320755 SRP54P61011 504 aaKnown RBP16.13■□□□□ 0.17
COL9A1-201ENST00000320755 MZT2BQ6NZ67 158 aa16.13■□□□□ 0.17
COL9A1-201ENST00000320755 CEACAM19Q7Z692 300 aa16.13■□□□□ 0.17
COL9A1-201ENST00000320755 SYT9Q86SS6 491 aa16.13■□□□□ 0.17
COL9A1-201ENST00000320755 CADM2Q8N3J6 435 aa16.13■□□□□ 0.17
COL9A1-201ENST00000320755 ARL14Q8N4G2 192 aa16.13■□□□□ 0.17
COL9A1-201ENST00000320755 ASCC1Q8N9N2 400 aaKnown RBP16.13■□□□□ 0.17
COL9A1-201ENST00000320755 OR13C5Q8NGS8 318 aa16.13■□□□□ 0.17
COL9A1-201ENST00000320755 OR4C6Q8NH72 309 aa16.13■□□□□ 0.17
COL9A1-201ENST00000320755 SMIM10Q96HG1 83 aa16.13■□□□□ 0.17
COL9A1-201ENST00000320755 C4orf36Q96KX1 117 aa16.13■□□□□ 0.17
COL9A1-201ENST00000320755 TIMP4Q99727 224 aa16.13■□□□□ 0.17
COL9A1-201ENST00000320755 CCDC3Q9BQI4 270 aa16.13■□□□□ 0.17
COL9A1-201ENST00000320755 IL21RQ9HBE5 538 aa16.13■□□□□ 0.17
COL9A1-201ENST00000320755 NTMQ9P121 344 aa16.13■□□□□ 0.17
COL9A1-201ENST00000320755 SPACA6W5XKT8 324 aa16.13■□□□□ 0.17
COL9A1-201ENST00000320755 GPR75O95800 540 aa16.12■□□□□ 0.17
COL9A1-201ENST00000320755 TNFRSF4P43489 277 aa16.12■□□□□ 0.17
COL9A1-201ENST00000320755 CDRT4Q8N9R6 151 aa16.12■□□□□ 0.17
COL9A1-201ENST00000320755 C17orf47Q8NEP4 570 aa16.12■□□□□ 0.17
COL9A1-201ENST00000320755 BRIX1Q8TDN6 353 aaKnown RBP16.12■□□□□ 0.17
COL9A1-201ENST00000320755 SNX18Q96RF0 628 aa16.12■□□□□ 0.17
COL9A1-201ENST00000320755 ASB6Q9NWX5 421 aa16.12■□□□□ 0.17
COL9A1-201ENST00000320755 ALG5Q9Y673 324 aa16.12■□□□□ 0.17
COL9A1-201ENST00000320755 OR10H2O60403 315 aa16.12■□□□□ 0.17
COL9A1-201ENST00000320755 RDH16O75452 317 aa16.12■□□□□ 0.17
COL9A1-201ENST00000320755 RCBTB2O95199 551 aa16.12■□□□□ 0.17
COL9A1-201ENST00000320755 PYCR1P32322 319 aa16.12■□□□□ 0.17
COL9A1-201ENST00000320755 POU6F2P78424 691 aaPredicted RBP16.12■□□□□ 0.17
COL9A1-201ENST00000320755 ALG11Q2TAA5 492 aa16.12■□□□□ 0.17
COL9A1-201ENST00000320755 OAFQ86UD1 273 aa16.12■□□□□ 0.17
COL9A1-201ENST00000320755 TMEM27Q9HBJ8 222 aa16.12■□□□□ 0.17
COL9A1-201ENST00000320755 TRIM36Q9NQ86 728 aa16.12■□□□□ 0.17
COL9A1-201ENST00000320755 RBFOX1Q9NWB1 397 aaKnown RBP16.12■□□□□ 0.17
COL9A1-201ENST00000320755 WBP1LQ9NX94 342 aa16.12■□□□□ 0.17
COL9A1-201ENST00000320755 RASD1Q9Y272 281 aa16.12■□□□□ 0.17
COL9A1-201ENST00000320755 CACNA1CQ13936 2221 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 SMLR1H3BR10 107 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 SERPINI2O75830 405 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 THBS1P07996 1170 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 CELA2BP08218 269 aaPredicted RBP16.11■□□□□ 0.17
COL9A1-201ENST00000320755 S100A1P23297 94 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 AMZ1Q400G9 498 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 NOXA1Q86UR1 476 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 OR52R1Q8NGF1 315 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 KIAA1143Q96AT1 154 aaPredicted RBP16.11■□□□□ 0.17
COL9A1-201ENST00000320755 MRGPRX1Q96LB2 322 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 TMEM43Q9BTV4 400 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 KCNN2Q9H2S1 579 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 CCDC86Q9H6F5 360 aaKnown RBP16.11■□□□□ 0.17
COL9A1-201ENST00000320755 PILRAQ9UKJ1 303 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 SIGLEC7Q9Y286 467 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 A0A1W2PRG6 482 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 RIIAD1A6NNX1 92 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 PRKNO60260 465 aaPredicted RBP16.11■□□□□ 0.17
COL9A1-201ENST00000320755 HCN1O60741 890 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 ADAM11O75078 769 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 IL9P15248 144 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 SDHBP21912 280 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 PPM1FP49593 454 aaPredicted RBP16.11■□□□□ 0.17
COL9A1-201ENST00000320755 C1orf61Q13536 156 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 FHL5Q5TD97 284 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 LNX2Q8N448 690 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 CSNK1A1LQ8N752 337 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 YIPF7Q8N8F6 280 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 TOR1AIP2Q8NFQ8 470 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 ELSPBP1Q96BH3 223 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 UPRTQ96BW1 309 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 POLHQ9Y253 713 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 MRPS7Q9Y2R9 242 aaKnown RBP16.11■□□□□ 0.17
COL9A1-201ENST00000320755 SEC16AO15027 2179 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 FANCMQ8IYD8 2048 aa16.11■□□□□ 0.17
COL9A1-201ENST00000320755 FAM172BPA6NC97 362 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 LRRN3E7EW58 273 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 LANCL1O43813 399 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 PLOD3O60568 738 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 CDK10Q15131 360 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 Q6ZSR6 202 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 KRT74Q7RTS7 529 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 RFLNBQ8N5W9 214 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 OR9A4Q8NGU2 314 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 KISS1RQ969F8 398 aaPredicted RBP16.1■□□□□ 0.17
COL9A1-201ENST00000320755 COQ7Q99807 217 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 NDC1Q9BTX1 674 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 LRRN3Q9H3W5 708 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 ENAMQ9NRM1 1142 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 J3QRE1 110 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 EMDP50402 254 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 PLAURQ03405 335 aa16.1■□□□□ 0.17
COL9A1-201ENST00000320755 ILF3Q12906 894 aaKnown RBP eCLIP16.1■□□□□ 0.17
COL9A1-201ENST00000320755 ERV3-1Q14264 604 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms