RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 LRRTM2O43300 516 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 TPST1O60507 370 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 HCN1O60741 890 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 HNRNPCL1O60812 293 aaKnown RBP7.11□□□□□ -1.27
CDC42-201ENST00000315554 ADAM11O75078 769 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 SCGB1D2O95969 90 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 DBIP07108 87 aaKnown RBP7.11□□□□□ -1.27
CDC42-201ENST00000315554 GKN3PP0CG01 181 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 HNRNPCL4P0DMR1 293 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 IL7RP16871 459 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 IL11P20809 199 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 RPS4Y1P22090 263 aaKnown RBP7.11□□□□□ -1.27
CDC42-201ENST00000315554 PRDX6P30041 224 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 PGM1P36871 562 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 GZMMP51124 257 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 P2RX1P51575 399 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 ZNF41P51814 821 aaPredicted RBP7.11□□□□□ -1.27
CDC42-201ENST00000315554 SLC7A2P52569 658 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 PSME3P61289 254 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 SLC25A3Q00325 362 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 HOXC5Q00444 222 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 CRYZQ08257 329 aaKnown RBP7.11□□□□□ -1.27
CDC42-201ENST00000315554 FOXF1Q12946 379 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 SKP2Q13309 424 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 OCLNQ16625 522 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 GXYLT1Q4G148 440 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 EMC4Q5J8M3 183 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 ZNF311Q5JNZ3 666 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 MRPL2Q5T653 305 aaKnown RBP7.11□□□□□ -1.27
CDC42-201ENST00000315554 REEP3Q6NUK4 255 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 POMZP3Q6PJE2 187 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 MTERF4Q7Z6M4 381 aaKnown RBP7.11□□□□□ -1.27
CDC42-201ENST00000315554 COMTD1Q86VU5 262 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 DOLPP1Q86YN1 238 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 MISPQ8IVT2 679 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 UBQLNLQ8IYU4 475 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 CLIP4Q8N3C7 705 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 C11orf65Q8NCR3 313 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 ATP6V1C2Q8NEY4 427 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 OR8J3Q8NGG0 315 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 FAM57AQ8TBR7 257 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 GPR119Q8TDV5 335 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 ABTB1Q969K4 478 aaPredicted RBP7.11□□□□□ -1.27
CDC42-201ENST00000315554 MPP4Q96JB8 637 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 RNF145Q96MT1 663 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 ZNF583Q96ND8 569 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 TIMP4Q99727 224 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 ECSITQ9BQ95 431 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 GPATCH1Q9BRR8 931 aaKnown RBP7.11□□□□□ -1.27
CDC42-201ENST00000315554 RSPO3Q9BXY4 272 aaPredicted RBP7.11□□□□□ -1.27
CDC42-201ENST00000315554 LAT2Q9GZY6 243 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 TMEM38AQ9H6F2 299 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 TMEM185BQ9H7F4 350 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 DNAJB12Q9NXW2 375 aaKnown RBP7.11□□□□□ -1.27
CDC42-201ENST00000315554 ICAM5Q9UMF0 924 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 ANGPT4Q9Y264 503 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 ZNF835Q9Y2P0 537 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 ZNF337Q9Y3M9 751 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 GMEB1Q9Y692 573 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 FAM47E-STBD1D6RA91 191 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 H0YC42 278 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 CCL21O00585 134 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 NME4O00746 187 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 PRRG2O14669 202 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 SEC14L5O43304 696 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 SUSD5O60279 629 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 EIF4E2O60573 245 aaKnown RBP7.11□□□□□ -1.27
CDC42-201ENST00000315554 GCM2O75603 506 aaPredicted RBP7.11□□□□□ -1.27
CDC42-201ENST00000315554 NPPAP01160 153 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 GUSBP08236 651 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 PABPC4LP0CB38 370 aaKnown RBP7.11□□□□□ -1.27
CDC42-201ENST00000315554 PEPDP12955 493 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 PRG2P13727 222 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 NID1P14543 1247 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 CCNA2P20248 432 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 POU3F2P20265 443 aaPredicted RBP7.11□□□□□ -1.27
CDC42-201ENST00000315554 MSX1P28360 303 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 PCGF2P35227 344 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 TPD52P55327 224 aaPredicted RBP7.11□□□□□ -1.27
CDC42-201ENST00000315554 GFRA1P56159 465 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 EEF1A1P68104 462 aaKnown RBP7.11□□□□□ -1.27
CDC42-201ENST00000315554 MXRA7P84157 204 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 LIPEQ05469 1076 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 SRSF1Q07955 248 aaKnown RBP eCLIP7.11□□□□□ -1.27
CDC42-201ENST00000315554 DMTNQ08495 405 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 GNA13Q14344 377 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 QPRTQ15274 297 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 VMACQ2NL98 169 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 PLPPR5Q32ZL2 321 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 LIN52Q52LA3 116 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 VASNQ6EMK4 673 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 NET1Q7Z628 596 aaPredicted RBP7.11□□□□□ -1.27
CDC42-201ENST00000315554 CALHM3Q86XJ0 350 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 ZGRF1Q86YA3 2104 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 SLC15A3Q8IY34 581 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 RNF148Q8N7C7 305 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 SMYD1Q8NB12 490 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 HIPK4Q8NE63 616 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 TOR1AIP2Q8NFQ8 470 aa7.11□□□□□ -1.27
CDC42-201ENST00000315554 OR5W2Q8NH69 310 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms