RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 AKAP14Q86UN6 197 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 TIGD4Q8IY51 512 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 ACOT4Q8N9L9 421 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 PLAGL1Q9UM63 463 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 RPL36Q9Y3U8 105 aaKnown RBP7.18□□□□□ -1.26
CNOT4-201ENST00000315544 NUMA1Q14980 2115 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 RNF222A6NCQ9 220 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 SOCS6O14544 535 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 HPGDSO60760 199 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 TPOP07202 933 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 CT45A8P0DMV1 189 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 CT45A9P0DMV2 189 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 ATF1P18846 271 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 CHI3L1P36222 383 aaPredicted RBP7.18□□□□□ -1.26
CNOT4-201ENST00000315544 HSD17B2P37059 387 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 STAT5AP42229 794 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 RORCP51449 518 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 CAV3P56539 151 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 OR10A3P58181 314 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 CTAG1AP78358 180 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 LTB4RQ15722 352 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 CT45A2Q5DJT8 189 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 LIPKQ5VXJ0 399 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 LRRTM4Q86VH4 590 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 RNF113BQ8IZP6 322 aaKnown RBP7.18□□□□□ -1.26
CNOT4-201ENST00000315544 SLC16A11Q8NCK7 471 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 DMBX1Q8NFW5 382 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 OR5H6Q8NGV6 325 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 GTPBP3Q969Y2 492 aaKnown RBP7.18□□□□□ -1.26
CNOT4-201ENST00000315544 RAB7BQ96AH8 199 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 MOAP1Q96BY2 351 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 KCTD12Q96CX2 325 aaKnown RBP7.18□□□□□ -1.26
CNOT4-201ENST00000315544 CYYR1Q96J86 154 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 CAMK1GQ96NX5 476 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 ZBTB18Q99592 522 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 ADAM19Q9H013 955 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 LYRM4Q9HD34 91 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 MAT2BQ9NZL9 334 aa7.18□□□□□ -1.26
CNOT4-201ENST00000315544 GSAPA4D1B5 854 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 MFSD2BA6NFX1 497 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 POP7O75817 140 aaKnown RBP7.17□□□□□ -1.26
CNOT4-201ENST00000315544 ADH5P11766 374 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 RRAS2P62070 204 aaPredicted RBP7.17□□□□□ -1.26
CNOT4-201ENST00000315544 TNFRSF17Q02223 184 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 ACSM2AQ08AH3 577 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 SGO1Q5FBB7 561 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 ACSM2BQ68CK6 577 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 TMEM65Q6PI78 240 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 GSG1LQ6UXU4 331 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 GET4Q7L5D6 327 aaPredicted RBP7.17□□□□□ -1.26
CNOT4-201ENST00000315544 ATP6V1C2Q8NEY4 427 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 PFN4Q8NHR9 129 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 FAM3CQ92520 227 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 PELI1Q96FA3 418 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 SHARPINQ9H0F6 387 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 ING2Q9H160 280 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 KLHDC2Q9Y2U9 406 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 MRPS23Q9Y3D9 190 aaKnown RBP7.17□□□□□ -1.26
CNOT4-201ENST00000315544 MAP4K5Q9Y4K4 846 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 IGHV1OR15-9A0A0B4J2B8 117 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 EDDM13A0A1B0GTR0 161 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 ZC3H12DA2A288 527 aaKnown RBP7.17□□□□□ -1.26
CNOT4-201ENST00000315544 NCR1O76036 304 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 IGKV3-11P04433 115 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 HOXD4P09016 255 aaPredicted RBP7.17□□□□□ -1.26
CNOT4-201ENST00000315544 CPN1P15169 458 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 PSMB9P28065 219 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 XKP51811 444 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 AP2S1P53680 142 aaPredicted RBP7.17□□□□□ -1.26
CNOT4-201ENST00000315544 COPZ1P61923 177 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 TRIM16LQ309B1 348 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 HSD17B12Q53GQ0 312 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 SMUG1Q53HV7 270 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.17□□□□□ -1.26
CNOT4-201ENST00000315544 RAET1GQ6H3X3 334 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 SIGIRRQ6IA17 410 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 TRIM40Q6P9F5 258 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 TEX261Q6UWH6 196 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 SLC44A2Q8IWA5 706 aaPredicted RBP7.17□□□□□ -1.26
CNOT4-201ENST00000315544 FAM174AQ8TBP5 190 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 PPCDCQ96CD2 204 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 CHCHD6Q9BRQ6 235 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 DLL4Q9NR61 685 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 CTPS2Q9NRF8 586 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 POLE3Q9NRF9 147 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 DUSP22Q9NRW4 184 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 CA5BQ9Y2D0 317 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 ENTPD2Q9Y5L3 495 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 U3KQ87 197 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 IFNW1P05000 195 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 ZNF806P0C7X5 589 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 HLA-GP17693 338 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 GABRG2P18507 467 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 RBMS1P29558 406 aaKnown RBP7.17□□□□□ -1.26
CNOT4-201ENST00000315544 DCDP81605 110 aaKnown RBP7.17□□□□□ -1.26
CNOT4-201ENST00000315544 FUT7Q11130 342 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 SQSTM1Q13501 440 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 FAM27D1Q5T7N8 215 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 TFAP2EQ6VUC0 442 aa7.17□□□□□ -1.26
CNOT4-201ENST00000315544 LHFPL3Q86UP9 236 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms