RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 TMPRSS12Q86WS5 348 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 METTL4Q8N3J2 472 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 SLC25A43Q8WUT9 341 aaPredicted RBP8.29□□□□□ -1.08
COL6A5-202ENST00000312481 TGM7Q96PF1 710 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 WRAP53Q9BUR4 548 aaKnown RBP8.29□□□□□ -1.08
COL6A5-202ENST00000312481 ABHD16AO95870 558 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 EPHA4P54764 986 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 TOMM34Q15785 309 aaPredicted RBP8.29□□□□□ -1.08
COL6A5-202ENST00000312481 DNAAF1Q8NEP3 725 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 OR52B6Q8NGF0 335 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 PHOSPHO2Q8TCD6 241 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 LRRC15Q8TF66 581 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 ZBTB20Q9HC78 741 aaPredicted RBP8.29□□□□□ -1.08
COL6A5-202ENST00000312481 SPHK2Q9NRA0 654 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 OSER1Q9NX31 292 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 EDARQ9UNE0 448 aa8.29□□□□□ -1.08
COL6A5-202ENST00000312481 TSPAN15O95858 294 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 SRCP12931 536 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 IFNGR1P15260 489 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 FPGSQ05932 587 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 FCRL6Q6DN72 434 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 TMEM150AQ86TG1 271 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 DTD2Q96FN9 168 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 TSPAN10Q9H1Z9 355 aaPredicted RBP8.28□□□□□ -1.08
COL6A5-202ENST00000312481 H2BFMP0C1H6 154 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 DRD1P21728 446 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 EVX2Q03828 476 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 SLC22A25Q6T423 547 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 DEFB128Q7Z7B8 93 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 COMMD7Q86VX2 200 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 KCNRGQ8N5I3 272 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 GOT1L1Q8NHS2 421 aaPredicted RBP8.28□□□□□ -1.08
COL6A5-202ENST00000312481 DUSP19Q8WTR2 217 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 MALSU1Q96EH3 234 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 C10orf90Q96M02 699 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 ABCG4Q9H172 646 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 AFF3P51826 1226 aaKnown RBP8.28□□□□□ -1.08
COL6A5-202ENST00000312481 CLRN1P58418 232 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 ARSIQ5FYB1 569 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 ANKRD16Q6P6B7 361 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 RBMS3Q6XE24 437 aaKnown RBP8.28□□□□□ -1.08
COL6A5-202ENST00000312481 ATG5Q9H1Y0 275 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 PDE7BQ9NP56 450 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 GPR83Q9NYM4 423 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 COL11A2P13942 1736 aaPredicted RBP8.28□□□□□ -1.08
COL6A5-202ENST00000312481 PRSS44E7EML9 344 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 DUX1O43812 170 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 KCNQ1P51787 676 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 AQP6Q13520 282 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 PCK2Q16822 640 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 Q499Y3 187 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 FAM122BQ7Z309 247 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 NUDT9Q9BW91 350 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 CCSER2Q9H7U1 834 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 FBXL12Q9NXK8 326 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 SLC2A6Q9UGQ3 507 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 A0A087WV62 115 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 SDC3O75056 442 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 GM2AP17900 193 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 PAN3Q58A45 887 aaKnown RBP8.28□□□□□ -1.08
COL6A5-202ENST00000312481 FAHD1Q6P587 224 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 GPR155Q7Z3F1 870 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 SKA3Q8IX90 412 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 AP1S3Q96PC3 154 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 MCOLN1Q9GZU1 580 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 DNTTIP1Q9H147 329 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 RHBGQ9H310 441 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 POT1Q9NUX5 634 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 FANCMQ8IYD8 2048 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 S100A11P31949 105 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 GSK3AP49840 483 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 CCR9P51686 369 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 CYP27C1Q4G0S4 372 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 FAHD2BQ6P2I3 314 aaPredicted RBP8.28□□□□□ -1.08
COL6A5-202ENST00000312481 NAXDQ8IW45 347 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 OR6M1Q8NGM8 313 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 SCARB1Q8WTV0 552 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 FAHD2AQ96GK7 314 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 KCNJ15Q99712 375 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 MFFQ9GZY8 342 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 RIMS4Q9H426 269 aaPredicted RBP8.28□□□□□ -1.08
COL6A5-202ENST00000312481 ZCCHC4Q9H5U6 513 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 FBXL3Q9UKT7 428 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 PLXNB3Q9ULL4 1909 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 ANHXE9PGG2 379 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 ARHGAP33O14559 1287 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 MBP02144 154 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 OR12D1P0DN82 309 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 FOSL1P15407 271 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 NKX6-1P78426 367 aaPredicted RBP8.28□□□□□ -1.08
COL6A5-202ENST00000312481 PRKCZQ05513 592 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 TMEM31Q5JXX7 168 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 RNF111Q6ZNA4 994 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 TMEM239Q8WW34 195 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 DMRTB1Q96MA1 342 aa8.28□□□□□ -1.08
COL6A5-202ENST00000312481 ZSCAN5BA6NJL1 495 aa8.27□□□□□ -1.08
COL6A5-202ENST00000312481 LCMT2O60294 686 aaKnown RBP8.27□□□□□ -1.08
COL6A5-202ENST00000312481 C1orf105O95561 183 aa8.27□□□□□ -1.08
COL6A5-202ENST00000312481 CHATP28329 748 aa8.27□□□□□ -1.08
COL6A5-202ENST00000312481 GPR85P60893 370 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms