RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 S100A9P06702 114 aaKnown RBP11.8□□□□□ -0.52
RETREG3-201ENST00000309428 CSNK2A2P19784 350 aaPredicted RBP11.8□□□□□ -0.52
RETREG3-201ENST00000309428 F8A1P23610 371 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 ITGA3P26006 1051 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 GDI2P50395 445 aaKnown RBP11.8□□□□□ -0.52
RETREG3-201ENST00000309428 TAF13Q15543 124 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 ZCCHC12Q6PEW1 402 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 GPR155Q7Z3F1 870 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 SLC44A3Q8N4M1 653 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 CDS1Q92903 461 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 CPNE2Q96FN4 548 aaPredicted RBP11.8□□□□□ -0.52
RETREG3-201ENST00000309428 ASB16Q96NS5 453 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 MS4A7Q9GZW8 240 aaPredicted RBP11.8□□□□□ -0.52
RETREG3-201ENST00000309428 MIXL1Q9H2W2 232 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 RETREG1Q9H6L5 497 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 BRF2Q9HAW0 419 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 A0A1W2PR48 441 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 ANXA2P2A6NMY6 339 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 H7C2Y5 167 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 HMGN4O00479 90 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 SDC3O75056 442 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 AIFM1O95831 613 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 S100A6P06703 90 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 ANXA2P07355 339 aaKnown RBP11.8□□□□□ -0.52
RETREG3-201ENST00000309428 HCCSP53701 268 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 EPHA5P54756 1037 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 CSNK1G2P78368 415 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 DGCR2P98153 550 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 ILKQ13418 452 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 KCNC3Q14003 757 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 ACSM3Q53FZ2 586 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 C3P1Q6ZMU1 363 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 RTL4Q6ZR62 310 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 OR5P2Q8WZ92 322 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 HHIPL1Q96JK4 782 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 ZNF514Q96K75 400 aaPredicted RBP11.8□□□□□ -0.52
RETREG3-201ENST00000309428 PLA2G12AQ9BZM1 189 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 MCCC2Q9HCC0 563 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 TBC1D29Q9UFV1 150 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 GPR55Q9Y2T6 319 aaPredicted RBP11.8□□□□□ -0.52
RETREG3-201ENST00000309428 TRBV2A0A0J9YWF9 115 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 GTPBP1O00178 669 aaKnown RBP11.8□□□□□ -0.52
RETREG3-201ENST00000309428 FZD7O75084 574 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 RGS9O75916 674 aaPredicted RBP11.8□□□□□ -0.52
RETREG3-201ENST00000309428 CTSEP14091 401 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 VAMP1P23763 118 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 ETV6P41212 452 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 SNRPNP63162 240 aaKnown RBP11.8□□□□□ -0.52
RETREG3-201ENST00000309428 SHC2P98077 582 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 RGS1Q08116 209 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 TSEN54Q7Z6J9 526 aaKnown RBP11.8□□□□□ -0.52
RETREG3-201ENST00000309428 COMTD1Q86VU5 262 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 BPHLQ86WA6 291 aaPredicted RBP11.8□□□□□ -0.52
RETREG3-201ENST00000309428 NKAIN4Q8IVV8 208 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 FAM160A2Q8N612 972 aaPredicted RBP11.8□□□□□ -0.52
RETREG3-201ENST00000309428 CLDN22Q8N7P3 220 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 CHST4Q8NCG5 386 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 SGTBQ96EQ0 304 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 C4orf36Q96KX1 117 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 DCLRE1CQ96SD1 692 aaKnown RBP11.8□□□□□ -0.52
RETREG3-201ENST00000309428 OR52A5Q9H2C5 316 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 NKX2-4Q9H2Z4 354 aa11.8□□□□□ -0.52
RETREG3-201ENST00000309428 SPINT1O43278 529 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 RP2O75695 350 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 CISD3P0C7P0 127 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 CPMP14384 443 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 CXCL3P19876 107 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 RAB28P51157 221 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 TCTE1Q5JU00 501 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 ZNF627Q7L945 461 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 COMMD2Q86X83 199 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 POGLUT1Q8NBL1 392 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 TSEN15Q8WW01 171 aaKnown RBP11.79□□□□□ -0.52
RETREG3-201ENST00000309428 ZNF354BQ96LW1 612 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 SDHCQ99643 169 aaPredicted RBP11.79□□□□□ -0.52
RETREG3-201ENST00000309428 ZNF559Q9BR84 538 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 MS4A8Q9BY19 250 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 LMAN2LQ9H0V9 348 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 EXO5Q9H790 373 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 TREM1Q9NP99 234 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 COPZ2Q9P299 210 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 FBXL2Q9UKC9 423 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 PLXND1Q9Y4D7 1925 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 TRIM23P36406 574 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 PPP1CAP62136 330 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 PITPNAQ00169 270 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 HSD17B12Q53GQ0 312 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 TMEM69Q5SWH9 247 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 MSANTD1Q6ZTZ1 278 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 OR5W2Q8NH69 310 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 FANK1Q8TC84 345 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 OSTF1Q92882 214 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 SFXN2Q96NB2 322 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 FOXN4Q96NZ1 517 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 FKBP14Q9NWM8 211 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 NDUFB11Q9NX14 153 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 A0A1W2PRQ8 180 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 ACOD1A6NK06 481 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 TOR1AO14656 332 aa11.79□□□□□ -0.52
RETREG3-201ENST00000309428 SLC43A1O75387 559 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms