RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 FABP6P51161 128 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 MRPL49Q13405 166 aaKnown RBP11.88□□□□□ -0.51
USP38-201ENST00000307017 CDONQ4KMG0 1287 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 TMEM268Q5VZI3 342 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 FIGLAQ6QHK4 219 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 ZNF546Q86UE3 836 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 OR13C2Q8NGS9 318 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 ZBTB8AQ96BR9 441 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 TEPSINQ96N21 525 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 KLHL13Q9P2N7 655 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 COQ4Q9Y3A0 265 aa11.88□□□□□ -0.51
USP38-201ENST00000307017 ANKRD61A6NGH8 418 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 GABRR3A8MPY1 467 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 ANKRD28O15084 1053 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 SMAD6O43541 496 aaKnown RBP11.87□□□□□ -0.51
USP38-201ENST00000307017 XRCC3O43542 346 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 OSMP13725 252 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 ZNF30P17039 623 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 NDUFS1P28331 727 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 ARHGAP11AQ6P4F7 1023 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 ENTHD1Q8IYW4 607 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 BORCS7Q96B45 105 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 ZDHHC12Q96GR4 267 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 GPR78Q96P69 363 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 ZFYVE21Q9BQ24 234 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 OCSTAMPQ9BR26 566 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 C20orf27Q9GZN8 174 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 FOLH1BQ9HBA9 442 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 PCDHB16Q9NRJ7 776 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 POLHQ9Y253 713 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 NWD2Q9ULI1 1742 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 TMEM235A6NFC5 223 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 LGALS8O00214 317 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 EFSO43281 561 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 IGHV3-9P01782 118 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 FUT1P19526 365 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 TNFSF8P32971 234 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 CDK3Q00526 305 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 LINC00346Q8IVM7 164 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 WFIKKN2Q8TEU8 576 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 ZC3HAV1LQ96H79 300 aaKnown RBP11.87□□□□□ -0.51
USP38-201ENST00000307017 RANBP9Q96S59 729 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 T-ENOLP0DO92 83 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 CDK2P24941 298 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 WNT4P56705 351 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 UBE2MP61081 183 aaKnown RBP11.87□□□□□ -0.51
USP38-201ENST00000307017 INAVAQ3KP66 663 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 PODNL1Q6PEZ8 512 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 C15orf40Q8WUR7 153 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 ZFAND2BQ8WV99 257 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 GAB3Q8WWW8 586 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 KCNJ9Q92806 393 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 NKX3-1Q99801 234 aaPredicted RBP11.87□□□□□ -0.51
USP38-201ENST00000307017 MKRN2Q9H000 416 aaKnown RBP11.87□□□□□ -0.51
USP38-201ENST00000307017 TSPAN10Q9H1Z9 355 aaPredicted RBP11.87□□□□□ -0.51
USP38-201ENST00000307017 KNDC1Q76NI1 1749 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 SURF4O15260 269 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 STC2O76061 302 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 GASTP01350 101 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 AKAIN1P0CW23 69 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 THBS2P35442 1172 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 ATP4BP51164 291 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 SF3B4Q15427 424 aaKnown RBP eCLIP11.87□□□□□ -0.51
USP38-201ENST00000307017 TAS1R1Q7RTX1 841 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 HS6ST2Q96MM7 605 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 SLC6A17Q9H1V8 727 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 APMAPQ9HDC9 416 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 PLEKHM1Q9Y4G2 1056 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 CD300LBA8K4G0 201 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 ADAMTS4O75173 837 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 FDXRP22570 491 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 SOX9P48436 509 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 CXADRP78310 365 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 LTBQ06643 244 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 FAAP20Q6NZ36 180 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 ESPNLQ6ZVH7 1005 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 PRSS48Q7RTY5 328 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 MRPL21Q7Z2W9 205 aaKnown RBP11.87□□□□□ -0.51
USP38-201ENST00000307017 OR4K15Q8NH41 348 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 RLN3Q8WXF3 142 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 MTCH1Q9NZJ7 389 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 SNED1Q8TER0 1413 aa11.87□□□□□ -0.51
USP38-201ENST00000307017 A0A0U1RQF3 1178 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 ADH1BP00325 375 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 RAB3AP20336 220 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 METTL11BQ5VVY1 283 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 CDCA2Q69YH5 1023 aaPredicted RBP11.86□□□□□ -0.51
USP38-201ENST00000307017 SLCO2A1Q92959 643 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 DCBLD2Q96PD2 775 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 ST6GALNAC4Q9H4F1 302 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 PLEK2Q9NYT0 353 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 C19orf25Q9UFG5 118 aaPredicted RBP11.86□□□□□ -0.51
USP38-201ENST00000307017 CAMK2AQ9UQM7 478 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 KIDINS220Q9ULH0 1771 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 IGKV6D-41A0A0C4DH26 115 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 ZNF865P0CJ78 1059 aaPredicted RBP11.86□□□□□ -0.51
USP38-201ENST00000307017 SYPL1Q16563 259 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 LRIF1Q5T3J3 769 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 PRAMEF20Q5VT98 475 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 GLB1L2Q8IW92 636 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms