RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 SERPINB7O75635 380 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 LDLRP01130 860 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 LINGO3P0C6S8 592 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 GP1BBP13224 206 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CPN1P15169 458 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PRKCAP17252 672 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ADH6P28332 368 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 AQP1P29972 269 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 RYKP34925 604 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PCGF2P35227 344 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 STARP49675 285 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 B3GALT5-AS1P59052 145 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 NCALDP61601 193 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SELENBP1Q13228 472 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 MAPK11Q15759 364 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 BCL2A1Q16548 175 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ACSF3Q4G176 576 aaPredicted RBP9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 RABL3Q5HYI8 236 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 EMC4Q5J8M3 183 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PDSS1Q5T2R2 415 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 C3orf33Q6P1S2 294 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ERICH5Q6P6B1 374 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ZNF550Q7Z398 422 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 NET1Q7Z628 596 aaPredicted RBP9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 TREML1Q86YW5 311 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 LACC1Q8IV20 430 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 C10orf111Q8N326 155 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 BHLHE22Q8NFJ8 381 aaPredicted RBP9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 OR10Q1Q8NGQ4 319 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 FBXO27Q8NI29 283 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 GPR119Q8TDV5 335 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SLC26A7Q8TE54 656 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 RND1Q92730 232 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 MRGPRX4Q96LA9 322 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 HOPXQ9BPY8 73 aaPredicted RBP9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 DNAJB12Q9NXW2 375 aaKnown RBP9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ZNF337Q9Y3M9 751 aa9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SPIN1Q9Y657 262 aaPredicted RBP9.94□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CLEC18AA5D8T8 446 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CDHR4A6H8M9 788 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CFAP73A6NFT4 308 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 FAM220BPB1ANY3 271 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 EIF1AYO14602 144 aaKnown RBP9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ZNF708P17019 499 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PRKAR1BP31321 381 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CLDN18P56856 261 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 NUP107P57740 925 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 COPZ1P61923 177 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 RAC1P63000 192 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 EEF1A1P68104 462 aaKnown RBP9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 MXRA7P84157 204 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SRSF1Q07955 248 aaKnown RBP eCLIP9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PMPCAQ10713 525 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SGCBQ16585 318 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 VMACQ2NL98 169 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 TMEM44Q2T9K0 475 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PPP4R4Q6NUP7 873 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 POMZP3Q6PJE2 187 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CLEC18BQ6UXF7 455 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 HACD2Q6Y1H2 254 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 P4HA3Q7Z4N8 544 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PATL1Q86TB9 770 aaKnown RBP9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PTOV1Q86YD1 416 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ARMC8Q8IUR7 673 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 GRAMD2AQ8IUY3 354 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ZZZ3Q8IYH5 903 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ZNF808Q8N4W9 903 aaPredicted RBP9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CLEC18CQ8NCF0 446 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ZPLD1Q8TCW7 415 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 BCAS4Q8TDM0 211 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 RASSF5Q8WWW0 418 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CNOT9Q92600 299 aaKnown RBP9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 REXO5Q96IC2 774 aaKnown RBP9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 DMRTA2Q96SC8 542 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 TTYH2Q9BSA4 534 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PIF1Q9H611 641 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 TMEM185BQ9H7F4 350 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SERINC1Q9NRX5 453 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PAQR5Q9NXK6 330 aaPredicted RBP9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 KLHL28Q9NXS3 571 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 TAGLN3Q9UI15 199 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 FAM215AQ9Y5M1 114 aa9.93□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 PCNX1Q96RV3 2341 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CD8B2A6NJW9 211 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CLCA1A8K7I4 914 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 BCAS1O75363 584 aaPredicted RBP9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 EPPINO95925 133 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 IL2RAP01589 272 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SLC7A1P30825 629 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SFTPDP35247 375 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 HTR3AP46098 478 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 EIF1AXP47813 144 aaKnown RBP9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 CPA2P48052 419 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 IDH2P48735 452 aaKnown RBP9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SLC7A2P52569 658 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 SESN3P58005 492 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 ADORA2A-AS1P86434 159 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 MERTKQ12866 999 aa9.92□□□□□ -0.82
CSPG4P1Y-201ENST00000306641 EPS8Q12929 822 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms