RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 SLC22A18Q96BI1 424 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 TBL1XR1Q9BZK7 514 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 TMEM168Q9H0V1 697 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 GPATCH2Q9NW75 528 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 GPR55Q9Y2T6 319 aaPredicted RBP12.41□□□□□ -0.42
CASC4-201ENST00000299957 GXYLT2A0PJZ3 443 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 SLC19A2O60779 497 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 SERPINA3P01011 423 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 PTPN6P29350 595 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 CCKBRP32239 447 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 NRSN1Q8IZ57 195 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 FBXL6Q8N531 539 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 OR10H5Q8NGA6 315 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 OR4D11Q8NGI4 311 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 METTL21AQ8WXB1 218 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 OR2S2Q9NQN1 319 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 CDHR4A6H8M9 788 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 FFAR1O14842 300 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 CTXN1P60606 82 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 AGERQ15109 404 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 FAM78AQ5JUQ0 283 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 YOD1Q5VVQ6 348 aaPredicted RBP12.41□□□□□ -0.42
CASC4-201ENST00000299957 COMMD7Q86VX2 200 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 KLHDC8BQ8IXV7 354 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 OR9A4Q8NGU2 314 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 FCAMRQ8WWV6 532 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 CNRIP1Q96F85 164 aaPredicted RBP12.41□□□□□ -0.42
CASC4-201ENST00000299957 NMNAT3Q96T66 252 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 S100A13Q99584 98 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 PINK1Q9BXM7 581 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 GABARAPL1Q9H0R8 117 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 DIABLOQ9NR28 239 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 DIMT1Q9UNQ2 313 aaKnown RBP12.41□□□□□ -0.42
CASC4-201ENST00000299957 FLVCR2Q9UPI3 526 aa12.41□□□□□ -0.42
CASC4-201ENST00000299957 TFP02787 698 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 IL12BP29460 328 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 GABRA5P31644 462 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 BMPR1AP36894 532 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 SLC35D2Q76EJ3 337 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 GDF7Q7Z4P5 450 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 KRT77Q7Z794 578 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 SAMD14Q8IZD0 417 aaPredicted RBP12.4□□□□□ -0.42
CASC4-201ENST00000299957 SETD6Q8TBK2 473 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 ASB12Q8WXK4 309 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 ELF4Q99607 663 aaPredicted RBP12.4□□□□□ -0.42
CASC4-201ENST00000299957 CMKLR1Q99788 373 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 CDCA4Q9BXL8 241 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 ATG5Q9H1Y0 275 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 GRHPRQ9UBQ7 328 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 FBXL4Q9UKA2 621 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 ADAM18Q9Y3Q7 739 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 MAB21L2Q9Y586 359 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 ARFIP1P53367 373 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 RPS21P63220 83 aaKnown RBP12.4□□□□□ -0.42
CASC4-201ENST00000299957 FGL2Q14314 439 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 SF3A2Q15428 464 aaKnown RBP12.4□□□□□ -0.42
CASC4-201ENST00000299957 PRAMEF17Q5VTA0 474 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 TANGO2Q6ICL3 276 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 ZNF101Q8IZC7 436 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 DNAAF1Q8NEP3 725 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 ZDHHC1Q8WTX9 485 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 FAM46BQ96A09 425 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 TSSK2Q96PF2 358 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 ZNF471Q9BX82 626 aaPredicted RBP12.4□□□□□ -0.42
CASC4-201ENST00000299957 ULBP3Q9BZM4 244 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 TRPV4Q9HBA0 871 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 FOLH1BQ9HBA9 442 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 HOXC11O43248 304 aaPredicted RBP12.4□□□□□ -0.42
CASC4-201ENST00000299957 ICMTO60725 284 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 CD2P06729 351 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 HOXC8P31273 242 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 RRAS2P62070 204 aaPredicted RBP12.4□□□□□ -0.42
CASC4-201ENST00000299957 SNTA1Q13424 505 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 DUSP5Q16690 384 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 DMRTC1Q5HYR2 192 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 Q6ZNB5 142 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 SIAH3Q8IW03 269 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 GIMAP1Q8WWP7 306 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 LYSMD1Q96S90 227 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 RAD9AQ99638 391 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 SRRQ9GZT4 340 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 C11orf49Q9H6J7 331 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 PLCXD1Q9NUJ7 323 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 ZSCAN32Q9NX65 697 aa12.4□□□□□ -0.42
CASC4-201ENST00000299957 LRIT2A6NDA9 550 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 POM121BA6NF01 834 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 MPEG1Q2M385 716 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 WDR45BQ5MNZ6 344 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 NDUFAF7Q7L592 441 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 KANSL1Q7Z3B3 1105 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 OR6F1Q8NGZ6 308 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 ELP4Q96EB1 424 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 JSRP1Q96MG2 331 aaPredicted RBP12.39□□□□□ -0.43
CASC4-201ENST00000299957 SEC22CQ9BRL7 303 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 BARHL1Q9BZE3 327 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 SEMA4CQ9C0C4 833 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 PCDHGB1Q9Y5G3 927 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 RNF13O43567 381 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 CLEC3AO75596 197 aa12.39□□□□□ -0.43
CASC4-201ENST00000299957 RBBP9O75884 186 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms