RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 OR10A3P58181 314 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 AP3S2P59780 193 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 WDR5P61964 334 aaKnown RBP8.59□□□□□ -1.03
PDGFC-201ENST00000274071 MRPS11P82912 194 aaKnown RBP8.59□□□□□ -1.03
PDGFC-201ENST00000274071 INSM1Q01101 510 aaPredicted RBP8.59□□□□□ -1.03
PDGFC-201ENST00000274071 RING1Q06587 406 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 SYT14P1Q58G82 188 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 XKR6Q5GH73 641 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 FAM69AQ5T7M9 428 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 C12orf73Q69YU5 71 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 ZNF770Q6IQ21 691 aaPredicted RBP8.59□□□□□ -1.03
PDGFC-201ENST00000274071 ESPNLQ6ZVH7 1005 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 ARMCX2Q7L311 632 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 ZNF546Q86UE3 836 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 ZBTB8OSQ8IWT0 167 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 CELF5Q8N6W0 485 aaKnown RBP8.59□□□□□ -1.03
PDGFC-201ENST00000274071 TTC16Q8NEE8 873 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 XAGE5Q8WWM1 108 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 KCTD12Q96CX2 325 aaKnown RBP8.59□□□□□ -1.03
PDGFC-201ENST00000274071 PHYHIPLQ96FC7 376 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 FUBP3Q96I24 572 aaKnown RBP eCLIP8.59□□□□□ -1.03
PDGFC-201ENST00000274071 NECAB3Q96P71 396 aaPredicted RBP8.59□□□□□ -1.03
PDGFC-201ENST00000274071 PANX1Q96RD7 426 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 TAAR9Q96RI9 348 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 NRIP2Q9BQI9 281 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 TMEM208Q9BTX3 173 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 OR51B6Q9H340 312 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 LRRN3Q9H3W5 708 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 LRTM1Q9HBL6 345 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 GPN1Q9HCN4 374 aaPredicted RBP8.59□□□□□ -1.03
PDGFC-201ENST00000274071 TVP23BQ9NYZ1 205 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 UXTQ9UBK9 157 aaPredicted RBP8.59□□□□□ -1.03
PDGFC-201ENST00000274071 GAB2Q9UQC2 676 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 EVPLQ92817 2033 aa8.59□□□□□ -1.03
PDGFC-201ENST00000274071 FAM86C2PA6NEL3 165 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 H3BN98 237 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 LRATO95237 230 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 CRYABP02511 175 aaKnown RBP8.58□□□□□ -1.04
PDGFC-201ENST00000274071 OSMP13725 252 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 UBE2MP61081 183 aaKnown RBP8.58□□□□□ -1.04
PDGFC-201ENST00000274071 RPS14P62263 151 aaKnown RBP8.58□□□□□ -1.04
PDGFC-201ENST00000274071 MRPS10P82664 201 aaKnown RBP8.58□□□□□ -1.04
PDGFC-201ENST00000274071 TMEM35AQ53FP2 167 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 EOGTQ5NDL2 527 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 TMEM244Q5VVB8 128 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 LIN54Q6MZP7 749 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 ACSM5Q6NUN0 579 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 ZNF783Q6ZMS7 281 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 RABEPKQ7Z6M1 372 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 MON1AQ86VX9 555 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 NPAS3Q8IXF0 933 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 RGL4Q8IZJ4 473 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 BBS10Q8TAM1 723 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 ING5Q8WYH8 240 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 TSSK3Q96PN8 268 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 SERINC2Q96SA4 455 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 COPS8Q99627 209 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 AARSD1Q9BTE6 412 aaKnown RBP8.58□□□□□ -1.04
PDGFC-201ENST00000274071 TRMT61BQ9BVS5 477 aaKnown RBP8.58□□□□□ -1.04
PDGFC-201ENST00000274071 SEMA3GQ9NS98 782 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 GDF2Q9UK05 429 aaPredicted RBP8.58□□□□□ -1.04
PDGFC-201ENST00000274071 ASF1AQ9Y294 204 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 FAM96BQ9Y3D0 163 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 SULT2B1O00204 365 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 HBP1O60381 514 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 KLHL18O94889 574 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 TACR1P25103 407 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 CD200P41217 278 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 RAP1AP62834 184 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 PITPNAQ00169 270 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 ELAVL1Q15717 326 aaKnown RBP8.58□□□□□ -1.04
PDGFC-201ENST00000274071 ZNF805Q5CZA5 627 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 RNASE10Q5GAN6 216 aaKnown RBP8.58□□□□□ -1.04
PDGFC-201ENST00000274071 SFXN4Q6P4A7 337 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 APOOLQ6UXV4 268 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 GOLGA7Q7Z5G4 137 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 SCD5Q86SK9 330 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 GPR137CQ8N3F9 429 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 FAM26EQ8N5C1 309 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 CPEB3Q8NE35 698 aaKnown RBP8.58□□□□□ -1.04
PDGFC-201ENST00000274071 SMAP2Q8WU79 429 aaPredicted RBP8.58□□□□□ -1.04
PDGFC-201ENST00000274071 NT5C3BQ969T7 300 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 MGME1Q9BQP7 344 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 ZNF471Q9BX82 626 aaPredicted RBP8.58□□□□□ -1.04
PDGFC-201ENST00000274071 LINC00597Q9H2U6 94 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 EPHX3Q9H6B9 360 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 MIEF1Q9NQG6 463 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 SLC35A3Q9Y2D2 325 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 SNX10Q9Y5X0 201 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 A0A0D9SG52 128 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 KANTRA0A1W2PQU2 76 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 E7EQ34 232 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 GOSR2O14653 212 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 FGF16O43320 207 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 NARSO43776 548 aaKnown RBP8.58□□□□□ -1.04
PDGFC-201ENST00000274071 ITGA10O75578 1167 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 F10P00742 488 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 IL5P05113 134 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 ITGA5P08648 1049 aa8.58□□□□□ -1.04
PDGFC-201ENST00000274071 GLP1RP43220 463 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms