RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 ADA2Q9NZK5 511 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 C6orf203Q9P0P8 240 aaPredicted RBP16.63■□□□□ 0.25
SDF4-201ENST00000263741 SH3BGRL2Q9UJC5 107 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 HELZ2Q9BYK8 2649 aaKnown RBP16.63■□□□□ 0.25
SDF4-201ENST00000263741 UBR5O95071 2799 aaPredicted RBP16.63■□□□□ 0.25
SDF4-201ENST00000263741 MYO7BQ6PIF6 2116 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 FAM220BPB1ANY3 271 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 ZIC3O60481 467 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 IGHG3P01860 377 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 PABPC4LP0CB38 370 aaKnown RBP16.63■□□□□ 0.25
SDF4-201ENST00000263741 UQCRBP14927 111 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 HK1P19367 917 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 RYKP34925 604 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 GSK3BP49841 420 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 PCBP3P57721 371 aaKnown RBP16.63■□□□□ 0.25
SDF4-201ENST00000263741 RBBP4Q09028 425 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 ZNF311Q5JNZ3 666 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 RAET1LQ5VY80 246 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 ZFP1Q6P2D0 407 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 BNC2Q6ZN30 1099 aaPredicted RBP16.63■□□□□ 0.25
SDF4-201ENST00000263741 SMYD1Q8NB12 490 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 FAM156AQ8NDB6 213 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 ICA1LQ8NDH6 482 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 FAM71CQ8NEG0 241 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 Q9H521 79 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 PTGES2Q9H7Z7 377 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 SPAG4Q9NPE6 437 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 PAPOLBQ9NRJ5 636 aaKnown RBP16.63■□□□□ 0.25
SDF4-201ENST00000263741 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.63■□□□□ 0.25
SDF4-201ENST00000263741 DNAJB12Q9NXW2 375 aaKnown RBP16.63■□□□□ 0.25
SDF4-201ENST00000263741 ABCD2Q9UBJ2 740 aa16.63■□□□□ 0.25
SDF4-201ENST00000263741 GPC6Q9Y625 555 aaPredicted RBP16.63■□□□□ 0.25
SDF4-201ENST00000263741 DIDO1Q9BTC0 2240 aaKnown RBP16.63■□□□□ 0.25
SDF4-201ENST00000263741 GCN1Q92616 2671 aaKnown RBP16.62■□□□□ 0.25
SDF4-201ENST00000263741 PCNX1Q96RV3 2341 aa16.62■□□□□ 0.25
SDF4-201ENST00000263741 NPIPA2E9PIF3 369 aa16.62■□□□□ 0.25
SDF4-201ENST00000263741 NPIPA3F8WFD2 350 aa16.62■□□□□ 0.25
SDF4-201ENST00000263741 AP3D1O14617 1153 aa16.62■□□□□ 0.25
SDF4-201ENST00000263741 CASQ2O14958 399 aaPredicted RBP16.62■□□□□ 0.25
SDF4-201ENST00000263741 TPST1O60507 370 aa16.62■□□□□ 0.25
SDF4-201ENST00000263741 CRYBA2P53672 197 aa16.62■□□□□ 0.25
SDF4-201ENST00000263741 DSCR4P56555 118 aaPredicted RBP16.62■□□□□ 0.25
SDF4-201ENST00000263741 EEF1A1P68104 462 aaKnown RBP16.62■□□□□ 0.25
SDF4-201ENST00000263741 LIN52Q52LA3 116 aa16.62■□□□□ 0.25
SDF4-201ENST00000263741 RNF220Q5VTB9 566 aa16.62■□□□□ 0.25
SDF4-201ENST00000263741 PRAMEF8Q5VWM4 474 aa16.62■□□□□ 0.25
SDF4-201ENST00000263741 PRAMEF7Q5VXH5 474 aa16.62■□□□□ 0.25
SDF4-201ENST00000263741 ALG2Q9H553 416 aa16.62■□□□□ 0.25
SDF4-201ENST00000263741 MED17Q9NVC6 651 aa16.62■□□□□ 0.25
SDF4-201ENST00000263741 QPCTLQ9NXS2 382 aa16.62■□□□□ 0.25
SDF4-201ENST00000263741 SLC35A3Q9Y2D2 325 aa16.62■□□□□ 0.25
SDF4-201ENST00000263741 TENM4Q6N022 2769 aa16.62■□□□□ 0.25
SDF4-201ENST00000263741 ARHGAP21Q5T5U3 1957 aa16.62■□□□□ 0.25
SDF4-201ENST00000263741 GKN3PP0CG01 181 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 ETS2P15036 469 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 P2RX1P51575 399 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 SH3BGRP55822 239 aaPredicted RBP16.61■□□□□ 0.25
SDF4-201ENST00000263741 ROR2Q01974 943 aaKnown RBP16.61■□□□□ 0.25
SDF4-201ENST00000263741 KRTCAP3Q53RY4 240 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 MICU2Q8IYU8 434 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 PGAM4Q8N0Y7 254 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 METTL25Q8N6Q8 603 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 NEIL3Q8TAT5 605 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 SH3GL3Q99963 347 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 SPATA9Q9BWV2 254 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 ACKR4Q9NPB9 350 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 CDHR4A6H8M9 788 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 EPPINO95925 133 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 ADH7P40394 386 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 B3GALT5-AS1P59052 145 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 LARS2Q15031 903 aaKnown RBP16.61■□□□□ 0.25
SDF4-201ENST00000263741 EIF2S3LQ2VIR3 472 aaKnown RBP16.61■□□□□ 0.25
SDF4-201ENST00000263741 PLPPR5Q32ZL2 321 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 ARHGAP11AQ6P4F7 1023 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 KRT73Q86Y46 540 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 GALNT11Q8NCW6 608 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 OR5M9Q8NGP3 310 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 ZFAND2BQ8WV99 257 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 TAMM41Q96BW9 452 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 SFXN2Q96NB2 322 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 LAT2Q9GZY6 243 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 CACYBPQ9HB71 228 aaKnown RBP16.61■□□□□ 0.25
SDF4-201ENST00000263741 TMEM181Q9P2C4 612 aa16.61■□□□□ 0.25
SDF4-201ENST00000263741 FASNP49327 2511 aaKnown RBP16.61■□□□□ 0.25
SDF4-201ENST00000263741 PRORSD1PA6NEY8 169 aa16.6■□□□□ 0.25
SDF4-201ENST00000263741 M0QX08 132 aa16.6■□□□□ 0.25
SDF4-201ENST00000263741 THBS1P07996 1170 aa16.6■□□□□ 0.25
SDF4-201ENST00000263741 PRG2P13727 222 aa16.6■□□□□ 0.25
SDF4-201ENST00000263741 ABOP16442 354 aa16.6■□□□□ 0.25
SDF4-201ENST00000263741 TCN1P20061 433 aaPredicted RBP16.6■□□□□ 0.25
SDF4-201ENST00000263741 PEX2P28328 305 aa16.6■□□□□ 0.25
SDF4-201ENST00000263741 MSX2P35548 267 aaPredicted RBP16.6■□□□□ 0.25
SDF4-201ENST00000263741 STARP49675 285 aa16.6■□□□□ 0.25
SDF4-201ENST00000263741 ZNF41P51814 821 aaPredicted RBP16.6■□□□□ 0.25
SDF4-201ENST00000263741 HOXC5Q00444 222 aa16.6■□□□□ 0.25
SDF4-201ENST00000263741 FOXF1Q12946 379 aa16.6■□□□□ 0.25
SDF4-201ENST00000263741 ELOAQ14241 798 aaKnown RBP16.6■□□□□ 0.25
SDF4-201ENST00000263741 LRRC23Q53EV4 343 aaPredicted RBP16.6■□□□□ 0.25
SDF4-201ENST00000263741 C3P1Q6ZMU1 363 aa16.6■□□□□ 0.25
SDF4-201ENST00000263741 ATCAYQ86WG3 371 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms