RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 SLC6A8P48029 635 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 COPZ1P61923 177 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 ALDH6A1Q02252 535 aaKnown RBP20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 NHLH1Q02575 133 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 CD47Q08722 323 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 TSPAN31Q12999 210 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 BLMHQ13867 455 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 IGF2-ASQ6U949 168 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 TMPRSS7Q7RTY8 843 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 MRGPREQ86SM8 312 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 ZNF786Q8N393 782 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 TMCO5AQ8N6Q1 288 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 OR5M3Q8NGP4 307 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 DNAJA4Q8WW22 397 aaPredicted RBP20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 FAM46AQ96IP4 442 aaKnown RBP20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 HS6ST2Q96MM7 605 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 APOL4Q9BPW4 351 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 P4HTMQ9NXG6 502 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 RPS6KB2Q9UBS0 482 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 MYRFQ9Y2G1 1151 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 ZFHX2Q9C0A1 2572 aaPredicted RBP20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 ZAR1LA6NP61 321 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 HCRTR2O43614 444 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 ITGA10O75578 1167 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 FPR3P25089 353 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 RBM34P42696 430 aaKnown RBP20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 CCR4P51679 360 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 PTGES3Q15185 160 aaKnown RBP20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 NTRK2Q16620 822 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 CTU2Q2VPK5 515 aaKnown RBP20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 WBP2NLQ6ICG8 309 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 MEX3DQ86XN8 651 aaKnown RBP20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 DTX1Q86Y01 620 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 MISPQ8IVT2 679 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 RNF217Q8TC41 542 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 SPACA9Q96E40 222 aaPredicted RBP20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 ING2Q9H160 280 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 KRCC1Q9NPI7 259 aaPredicted RBP20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 ASCL3Q9NQ33 180 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 DLL3Q9NYJ7 618 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 CNIH4Q9P003 139 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 ICAM5Q9UMF0 924 aa20.93■□□□□ 0.94
SMARCB1-201ENST00000263121 HEATR5AQ86XA9 2040 aa20.92■□□□□ 0.94
SMARCB1-201ENST00000263121 C17orf51A8MQB3 221 aa20.92■□□□□ 0.94
SMARCB1-201ENST00000263121 MASP2O00187 686 aa20.92■□□□□ 0.94
SMARCB1-201ENST00000263121 OR6B1O95007 311 aa20.92■□□□□ 0.94
SMARCB1-201ENST00000263121 SOX14O95416 240 aa20.92■□□□□ 0.94
SMARCB1-201ENST00000263121 NUP107P57740 925 aa20.92■□□□□ 0.94
SMARCB1-201ENST00000263121 Q0VFX4 171 aa20.92■□□□□ 0.94
SMARCB1-201ENST00000263121 CHAF1BQ13112 559 aa20.92■□□□□ 0.94
SMARCB1-201ENST00000263121 TMEM154Q6P9G4 183 aa20.92■□□□□ 0.94
SMARCB1-201ENST00000263121 ADAMTS17Q8TE56 1095 aa20.92■□□□□ 0.94
SMARCB1-201ENST00000263121 C3orf49Q96BT1 292 aa20.92■□□□□ 0.94
SMARCB1-201ENST00000263121 SH3YL1Q96HL8 342 aaPredicted RBP20.92■□□□□ 0.94
SMARCB1-201ENST00000263121 KLHDC3Q9BQ90 382 aa20.92■□□□□ 0.94
SMARCB1-201ENST00000263121 SCOCQ9UIL1 159 aa20.92■□□□□ 0.94
SMARCB1-201ENST00000263121 MRPS18BQ9Y676 258 aaKnown RBP20.92■□□□□ 0.94
SMARCB1-201ENST00000263121 IGFBP1P08833 259 aaPredicted RBP20.91■□□□□ 0.94
SMARCB1-201ENST00000263121 PTNP21246 168 aa20.91■□□□□ 0.94
SMARCB1-201ENST00000263121 MST1P26927 711 aa20.91■□□□□ 0.94
SMARCB1-201ENST00000263121 ELK4P28324 431 aa20.91■□□□□ 0.94
SMARCB1-201ENST00000263121 IDH2P48735 452 aaKnown RBP20.91■□□□□ 0.94
SMARCB1-201ENST00000263121 GAS1P54826 345 aa20.91■□□□□ 0.94
SMARCB1-201ENST00000263121 IL5RAQ01344 420 aa20.91■□□□□ 0.94
SMARCB1-201ENST00000263121 PRKCDQ05655 676 aa20.91■□□□□ 0.94
SMARCB1-201ENST00000263121 ZNF791Q3KP31 576 aaPredicted RBP20.91■□□□□ 0.94
SMARCB1-201ENST00000263121 LAIR2Q6ISS4 152 aa20.91■□□□□ 0.94
SMARCB1-201ENST00000263121 LSRQ86X29 649 aaPredicted RBP20.91■□□□□ 0.94
SMARCB1-201ENST00000263121 RAB43Q86YS6 212 aa20.91■□□□□ 0.94
SMARCB1-201ENST00000263121 PFN4Q8NHR9 129 aa20.91■□□□□ 0.94
SMARCB1-201ENST00000263121 YTHDF1Q9BYJ9 559 aaKnown RBP20.91■□□□□ 0.94
SMARCB1-201ENST00000263121 SELENONQ9NZV5 590 aa20.91■□□□□ 0.94
SMARCB1-201ENST00000263121 YARS2Q9Y2Z4 477 aaKnown RBP20.91■□□□□ 0.94
SMARCB1-201ENST00000263121 MED31Q9Y3C7 131 aa20.91■□□□□ 0.94
SMARCB1-201ENST00000263121 DMXL1Q9Y485 3027 aa20.91■□□□□ 0.94
SMARCB1-201ENST00000263121 TRIM64A6NGJ6 449 aa20.9■□□□□ 0.94
SMARCB1-201ENST00000263121 MAN1A2O60476 641 aa20.9■□□□□ 0.94
SMARCB1-201ENST00000263121 SMIM18P0DKX4 95 aa20.9■□□□□ 0.94
SMARCB1-201ENST00000263121 SOX3P41225 446 aa20.9■□□□□ 0.94
SMARCB1-201ENST00000263121 GPR4P46093 362 aa20.9■□□□□ 0.94
SMARCB1-201ENST00000263121 CTBP2P56545 445 aa20.9■□□□□ 0.94
SMARCB1-201ENST00000263121 MEP1AQ16819 746 aa20.9■□□□□ 0.94
SMARCB1-201ENST00000263121 KCTD21Q4G0X4 260 aa20.9■□□□□ 0.94
SMARCB1-201ENST00000263121 RASSF6Q6ZTQ3 369 aa20.9■□□□□ 0.94
SMARCB1-201ENST00000263121 KIF18BQ86Y91 864 aa20.9■□□□□ 0.94
SMARCB1-201ENST00000263121 OR10G3Q8NGC4 313 aa20.9■□□□□ 0.94
SMARCB1-201ENST00000263121 OR5W2Q8NH69 310 aa20.9■□□□□ 0.94
SMARCB1-201ENST00000263121 ZNF524Q96C55 264 aa20.9■□□□□ 0.94
SMARCB1-201ENST00000263121 CCNL2Q96S94 520 aaPredicted RBP20.9■□□□□ 0.94
SMARCB1-201ENST00000263121 MEPEQ9NQ76 525 aaPredicted RBP20.9■□□□□ 0.94
SMARCB1-201ENST00000263121 RYDENQ9NUL5 291 aaKnown RBP20.9■□□□□ 0.94
SMARCB1-201ENST00000263121 IL17BQ9UHF5 180 aa20.9■□□□□ 0.94
SMARCB1-201ENST00000263121 A0A087WUJ7 227 aa20.89■□□□□ 0.94
SMARCB1-201ENST00000263121 P2RX1P51575 399 aa20.89■□□□□ 0.94
SMARCB1-201ENST00000263121 MLF1P58340 268 aa20.89■□□□□ 0.94
SMARCB1-201ENST00000263121 MAD2L1BPQ15013 274 aaPredicted RBP20.89■□□□□ 0.94
SMARCB1-201ENST00000263121 RPS19BP1Q86WX3 136 aaKnown RBP20.89■□□□□ 0.94
SMARCB1-201ENST00000263121 IL22RA1Q8N6P7 574 aa20.89■□□□□ 0.94
SMARCB1-201ENST00000263121 HDAC2Q92769 488 aaKnown RBP20.89■□□□□ 0.94
SMARCB1-201ENST00000263121 CDCP1Q9H5V8 836 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms