RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 CHMP24386 653 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 IL5RAQ01344 420 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 CD47Q08722 323 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 CBLN3Q6UW01 205 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 MARCH9Q86YJ5 346 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 OR5M3Q8NGP4 307 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 FBLIM1Q8WUP2 373 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 RNF138Q8WVD3 245 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 FAM46AQ96IP4 442 aaKnown RBP11.91□□□□□ -0.5
VAMP7-201ENST00000262640 NODALQ96S42 347 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 GPA33Q99795 319 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 RTN4RQ9BZR6 473 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 TMEM5Q9Y2B1 443 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 MED31Q9Y3C7 131 aa11.91□□□□□ -0.5
VAMP7-201ENST00000262640 SLC30A4O14863 429 aa11.9□□□□□ -0.5
VAMP7-201ENST00000262640 PIP5K1CO60331 668 aa11.9□□□□□ -0.5
VAMP7-201ENST00000262640 OR6B1O95007 311 aa11.9□□□□□ -0.5
VAMP7-201ENST00000262640 PTGES3Q15185 160 aaKnown RBP11.9□□□□□ -0.5
VAMP7-201ENST00000262640 NTRK2Q16620 822 aa11.9□□□□□ -0.5
VAMP7-201ENST00000262640 KCTD21Q4G0X4 260 aa11.9□□□□□ -0.5
VAMP7-201ENST00000262640 IGF2-ASQ6U949 168 aa11.9□□□□□ -0.5
VAMP7-201ENST00000262640 ISLR2Q6UXK2 745 aa11.9□□□□□ -0.5
VAMP7-201ENST00000262640 LINC00114Q6XXX2 140 aa11.9□□□□□ -0.5
VAMP7-201ENST00000262640 MRGPREQ86SM8 312 aa11.9□□□□□ -0.5
VAMP7-201ENST00000262640 ARMC10Q8N2F6 343 aa11.9□□□□□ -0.5
VAMP7-201ENST00000262640 SPACA9Q96E40 222 aaPredicted RBP11.9□□□□□ -0.5
VAMP7-201ENST00000262640 ZNF426Q9BUY5 554 aa11.9□□□□□ -0.5
VAMP7-201ENST00000262640 P4HTMQ9NXG6 502 aa11.9□□□□□ -0.5
VAMP7-201ENST00000262640 YARS2Q9Y2Z4 477 aaKnown RBP11.9□□□□□ -0.5
VAMP7-201ENST00000262640 ZAR1LA6NP61 321 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 KLF4O43474 513 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 ITGA10O75578 1167 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 POU1F1P28069 291 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 IDH2P48735 452 aaKnown RBP11.89□□□□□ -0.51
VAMP7-201ENST00000262640 PRKCDQ05655 676 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 IL10RAQ13651 578 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 OPN5Q6U736 354 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 Q6ZPB1 254 aaPredicted RBP11.89□□□□□ -0.51
VAMP7-201ENST00000262640 RASSF6Q6ZTQ3 369 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 TMPRSS7Q7RTY8 843 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 DEPDC4Q8N2C3 294 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 HDAC2Q92769 488 aaKnown RBP11.89□□□□□ -0.51
VAMP7-201ENST00000262640 NKD1Q969G9 470 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 SH3YL1Q96HL8 342 aaPredicted RBP11.89□□□□□ -0.51
VAMP7-201ENST00000262640 CNIH4Q9P003 139 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 H3BN98 237 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 SOX14O95416 240 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 TP53P04637 393 aaPredicted RBP11.89□□□□□ -0.51
VAMP7-201ENST00000262640 PNMTP11086 282 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 PGCP20142 388 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 P2RX1P51575 399 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 CTBP2P56545 445 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 CHAF1BQ13112 559 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 MEP1AQ16819 746 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 CTU2Q2VPK5 515 aaKnown RBP11.89□□□□□ -0.51
VAMP7-201ENST00000262640 RBM48Q5RL73 367 aaKnown RBP11.89□□□□□ -0.51
VAMP7-201ENST00000262640 CCDC71Q8IV32 467 aaPredicted RBP11.89□□□□□ -0.51
VAMP7-201ENST00000262640 DND1Q8IYX4 353 aaKnown RBP11.89□□□□□ -0.51
VAMP7-201ENST00000262640 CDK20Q8IZL9 346 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 IL22RA1Q8N6P7 574 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 OR5W2Q8NH69 310 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 C3orf49Q96BT1 292 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 IP6K3Q96PC2 410 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 ICAM5Q9UMF0 924 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 ZNF292O60281 2723 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 CUL9Q8IWT3 2517 aa11.89□□□□□ -0.51
VAMP7-201ENST00000262640 A0A087WUJ7 227 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 ADAM10O14672 748 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 TP53I11O14683 189 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 ELK4P28324 431 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 GPR4P46093 362 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 SSR4P51571 173 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 MLF1P58340 268 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 CDC42P60953 191 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 NHLH1Q02575 133 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 C17orf67Q0P5P2 114 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 TOP3AQ13472 1001 aaPredicted RBP11.88□□□□□ -0.51
VAMP7-201ENST00000262640 CBFBQ13951 182 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 MAD2L1BPQ15013 274 aaPredicted RBP11.88□□□□□ -0.51
VAMP7-201ENST00000262640 ZNF791Q3KP31 576 aaPredicted RBP11.88□□□□□ -0.51
VAMP7-201ENST00000262640 C6orf141Q5SZD1 244 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 RPS19BP1Q86WX3 136 aaKnown RBP11.88□□□□□ -0.51
VAMP7-201ENST00000262640 MEX3DQ86XN8 651 aaKnown RBP11.88□□□□□ -0.51
VAMP7-201ENST00000262640 PFN4Q8NHR9 129 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 B4GALNT2Q8NHY0 566 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 ZNF563Q8TA94 476 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 FAM81AQ8TBF8 368 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 CDCP1Q9H5V8 836 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 C12orf10Q9HB07 376 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 HHATLQ9HCP6 504 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 BATF3Q9NR55 127 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 ZFHX2Q9C0A1 2572 aaPredicted RBP11.88□□□□□ -0.51
VAMP7-201ENST00000262640 SERPINA7P05543 415 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 IFI30P13284 250 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 ITPKBP27987 946 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 SOX3P41225 446 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 SLC1A3P43003 542 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 CDK5R2Q13319 367 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 SLX4IPQ5VYV7 408 aa11.88□□□□□ -0.51
VAMP7-201ENST00000262640 DTX1Q86Y01 620 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms