RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 CAPN10Q9HC96 672 aa16.2■□□□□ 0.18
TRAM1-201ENST00000262213 DLL4Q9NR61 685 aa16.2■□□□□ 0.18
TRAM1-201ENST00000262213 MRPL39Q9NYK5 338 aaKnown RBP16.2■□□□□ 0.18
TRAM1-201ENST00000262213 CES1P1Q9UKY3 287 aa16.2■□□□□ 0.18
TRAM1-201ENST00000262213 MAFFQ9ULX9 164 aa16.2■□□□□ 0.18
TRAM1-201ENST00000262213 FOXK2Q01167 660 aa16.2■□□□□ 0.18
TRAM1-201ENST00000262213 TMEM35AQ53FP2 167 aa16.2■□□□□ 0.18
TRAM1-201ENST00000262213 ERN2Q76MJ5 926 aaKnown RBP16.2■□□□□ 0.18
TRAM1-201ENST00000262213 GRASPQ7Z6J2 395 aaPredicted RBP16.2■□□□□ 0.18
TRAM1-201ENST00000262213 RAB42Q8N4Z0 105 aa16.2■□□□□ 0.18
TRAM1-201ENST00000262213 KCT2Q8NC54 265 aa16.2■□□□□ 0.18
TRAM1-201ENST00000262213 SMPDL3BQ92485 455 aa16.2■□□□□ 0.18
TRAM1-201ENST00000262213 NR4A3Q92570 626 aa16.2■□□□□ 0.18
TRAM1-201ENST00000262213 AHCYL2Q96HN2 611 aaKnown RBP16.2■□□□□ 0.18
TRAM1-201ENST00000262213 SYNDIG1Q9H7V2 258 aa16.2■□□□□ 0.18
TRAM1-201ENST00000262213 USP36Q9P275 1121 aaKnown RBP16.2■□□□□ 0.18
TRAM1-201ENST00000262213 UBQLN2Q9UHD9 624 aa16.2■□□□□ 0.18
TRAM1-201ENST00000262213 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 TRABD2BA6NFA1 517 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 LRRN3E7EW58 273 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 IFNA7P01567 189 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 ACRP10323 421 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 IL9P15248 144 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 GALP22466 123 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 ERVFC1P60507 584 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 ZNF85Q03923 595 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 CRMP1Q14194 572 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 AANATQ16613 207 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 GPR139Q6DWJ6 353 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 RPLP0P6Q8NHW5 317 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 GRHL3Q8TE85 626 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 PXYLP1Q8TE99 480 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 ADAMTS14Q8WXS8 1223 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 GIMAP5Q96F15 307 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 RBP7Q96R05 134 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 LRRN3Q9H3W5 708 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 SPHK1Q9NYA1 384 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 SPATA2Q9UM82 520 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 FAM86C2PA6NEL3 165 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 BHLHE40O14503 412 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 ASGR2P07307 311 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 UBL4AP11441 157 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 HTR2AP28223 471 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 P2RY2P41231 377 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 VIPR2P41587 438 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 ZP1P60852 638 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 ARHGEF6Q15052 776 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 MAPK14Q16539 360 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 HNRNPA1L2Q32P51 320 aaKnown RBP16.19■□□□□ 0.18
TRAM1-201ENST00000262213 TMEM65Q6PI78 240 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 RTL4Q6ZR62 310 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 BPHLQ86WA6 291 aaPredicted RBP16.19■□□□□ 0.18
TRAM1-201ENST00000262213 SERPINA12Q8IW75 414 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 SLC44A3Q8N4M1 653 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 OR2L5Q8NG80 312 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 MOAP1Q96BY2 351 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 COX14Q96I36 57 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 PRSS27Q9BQR3 290 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 OR10A4Q9H209 315 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 KRCC1Q9NPI7 259 aaPredicted RBP16.19■□□□□ 0.18
TRAM1-201ENST00000262213 MBNL1Q9NR56 388 aaKnown RBP16.19■□□□□ 0.18
TRAM1-201ENST00000262213 WSB2Q9NYS7 404 aaPredicted RBP16.19■□□□□ 0.18
TRAM1-201ENST00000262213 NUP50Q9UKX7 468 aa16.19■□□□□ 0.18
TRAM1-201ENST00000262213 TP53BP1Q12888 1972 aaPredicted RBP16.18■□□□□ 0.18
TRAM1-201ENST00000262213 RPS10-NUDT3A0A1W2PQS6 291 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 PLPP2O43688 288 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 PPP1R3DO95685 299 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 ADRB1P08588 477 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 PEPDP12955 493 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 RAB28P51157 221 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 RAB14P61106 215 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 DUSP5Q16690 384 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 PRAMEF8Q5VWM4 474 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 PRAMEF7Q5VXH5 474 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 MRM1Q6IN84 353 aaKnown RBP16.18■□□□□ 0.18
TRAM1-201ENST00000262213 LINGO2Q7L985 606 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 KANSL1Q7Z3B3 1105 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 GALNT11Q8NCW6 608 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 TMEM239Q8WW34 195 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 FBXO34Q9NWN3 711 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 CLDND1Q9NY35 253 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 MEIKINA0A087WXM9 373 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 UBL3O95164 117 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 SBK2P0C263 348 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 ZNF136P52737 540 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 SIM1P81133 766 aaPredicted RBP16.18■□□□□ 0.18
TRAM1-201ENST00000262213 ZIC1Q15915 447 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 MTSS1LQ765P7 747 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 TPRA1Q86W33 373 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 PGLYRP3Q96LB9 341 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 DNAH14Q0VDD8 3507 aa16.18■□□□□ 0.18
TRAM1-201ENST00000262213 SPTBP11277 2137 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 TEX51A0A1B0GUA7 166 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 PEX12O00623 359 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 GMDSO60547 372 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 SULT1A3P0DMM9 295 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 SULT1A4P0DMN0 295 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 CEBPBP17676 345 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 NAA10P41227 235 aaPredicted RBP16.17■□□□□ 0.18
TRAM1-201ENST00000262213 WASP42768 502 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms