RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 ACTG1P63261 375 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 KIAA1324Q6UXG2 1013 aaKnown RBP15.17■□□□□ 0.02
SREBF1-201ENST00000261646 SYT9Q86SS6 491 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 LRRC25Q8N386 305 aaPredicted RBP15.17■□□□□ 0.02
SREBF1-201ENST00000261646 RASGEF1AQ8N9B8 481 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 BPIFA2Q96DR5 249 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 PELOQ9BRX2 385 aaKnown RBP15.17■□□□□ 0.02
SREBF1-201ENST00000261646 TMEM168Q9H0V1 697 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 EXO1Q9UQ84 846 aaKnown RBP15.17■□□□□ 0.02
SREBF1-201ENST00000261646 BACE2Q9Y5Z0 518 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 TRIM64A6NGJ6 449 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 IRF5Q13568 498 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 KIAA0040Q15053 153 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 ZNF322Q6U7Q0 402 aaPredicted RBP15.17■□□□□ 0.02
SREBF1-201ENST00000261646 RSPO2Q6UXX9 243 aaPredicted RBP15.17■□□□□ 0.02
SREBF1-201ENST00000261646 RTN4RL1Q86UN2 441 aaPredicted RBP15.17■□□□□ 0.02
SREBF1-201ENST00000261646 PAQR8Q8TEZ7 354 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 NEURL3Q96EH8 262 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 CNTNAP3BQ96NU0 1288 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 RGCCQ9H4X1 137 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 MED16Q9Y2X0 877 aa15.17■□□□□ 0.02
SREBF1-201ENST00000261646 TXNL1O43396 289 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 DCNP07585 359 aaKnown RBP15.16■□□□□ 0.02
SREBF1-201ENST00000261646 ZNF35P13682 527 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 RAB3AP20336 220 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 CCKBRP32239 447 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 LSSP48449 732 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 CCNJQ5T5M9 372 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 MMP21Q8N119 569 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 C12orf45Q8N5I9 185 aaPredicted RBP15.16■□□□□ 0.02
SREBF1-201ENST00000261646 DPP7Q9UHL4 492 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 IER3IP1Q9Y5U9 82 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 PRICKLE3O43900 615 aaPredicted RBP15.16■□□□□ 0.02
SREBF1-201ENST00000261646 ETHE1O95571 254 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 PBX2P40425 430 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 CST9Q5W186 159 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 PRICKLE2Q7Z3G6 844 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 SVBPQ8N300 66 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 OR52N1Q8NH53 320 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 OR5AK2Q8NH90 309 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 PHOSPHO1Q8TCT1 267 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 TBC1D20Q96BZ9 403 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 PDXPQ96GD0 296 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 WDFY2Q96P53 400 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 PDFQ9HBH1 243 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 CHST2Q9Y4C5 530 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 WRBO00258 174 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 LATO43561 262 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 SLC6A11P48066 632 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 RFX2P48378 723 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 TSSK4Q6SA08 328 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 METTL21AQ8WXB1 218 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 CHMP1AQ9HD42 196 aaPredicted RBP15.16■□□□□ 0.02
SREBF1-201ENST00000261646 FANCFQ9NPI8 374 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 FLVCR2Q9UPI3 526 aa15.16■□□□□ 0.02
SREBF1-201ENST00000261646 A0A087WUU8 490 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 FOXE1O00358 373 aaPredicted RBP15.15■□□□□ 0.02
SREBF1-201ENST00000261646 EIF1AYO14602 144 aaKnown RBP15.15■□□□□ 0.02
SREBF1-201ENST00000261646 TPOP07202 933 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 EPHA5P54756 1037 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 RAB2AP61019 212 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 SLC35F2Q8IXU6 374 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 OR6M1Q8NGM8 313 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 UPRTQ96BW1 309 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 SEC22AQ96IW7 307 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 Q9N2J8 555 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 CAMK2AQ9UQM7 478 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 IFNA21P01568 189 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 SPARCP09486 303 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 C1SP09871 688 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 HTR1FP30939 366 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 EIF1AXP47813 144 aaKnown RBP15.15■□□□□ 0.02
SREBF1-201ENST00000261646 MRPS10P82664 201 aaKnown RBP15.15■□□□□ 0.02
SREBF1-201ENST00000261646 TEAD2Q15562 447 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 FAM27D1Q5T7N8 215 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 FAM71E1Q6IPT2 247 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 UCN3Q969E3 161 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 KLF16Q9BXK1 252 aaPredicted RBP15.15■□□□□ 0.02
SREBF1-201ENST00000261646 SPATA6Q9NWH7 488 aaPredicted RBP15.15■□□□□ 0.02
SREBF1-201ENST00000261646 SSC5DA1L4H1 1573 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 C11orf98E9PRG8 122 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 MTRF1O75570 445 aaKnown RBP15.15■□□□□ 0.02
SREBF1-201ENST00000261646 UBBP0CG47 229 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 UBCP0CG48 685 aaKnown RBP15.15■□□□□ 0.02
SREBF1-201ENST00000261646 PSMB5P28074 263 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 CCR9P51686 369 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 MAPK14Q16539 360 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 PRSS42Q7Z5A4 293 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 LRRC46Q96FV0 321 aa15.15■□□□□ 0.02
SREBF1-201ENST00000261646 GPN3Q9UHW5 284 aaPredicted RBP15.15■□□□□ 0.02
SREBF1-201ENST00000261646 TEX13DA0A0J9YY54 714 aaPredicted RBP15.14■□□□□ 0.01
SREBF1-201ENST00000261646 CDHR4A6H8M9 788 aa15.14■□□□□ 0.01
SREBF1-201ENST00000261646 ZNF878C9JN71 531 aa15.14■□□□□ 0.01
SREBF1-201ENST00000261646 CSTAP01040 98 aa15.14■□□□□ 0.01
SREBF1-201ENST00000261646 ANXA7P20073 488 aaKnown RBP15.14■□□□□ 0.01
SREBF1-201ENST00000261646 CXCR1P25024 350 aa15.14■□□□□ 0.01
SREBF1-201ENST00000261646 OR10A3P58181 314 aa15.14■□□□□ 0.01
SREBF1-201ENST00000261646 TMEM35AQ53FP2 167 aa15.14■□□□□ 0.01
SREBF1-201ENST00000261646 CAMKVQ8NCB2 501 aa15.14■□□□□ 0.01
SREBF1-201ENST00000261646 SCARB1Q8WTV0 552 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms